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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00071: Fatty acid metabolism

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aae00071 Aquifex aeolicus SBML MML
aau00071 Arthrobacter aurescens SBML MML
aav00071 Acidovorax avenae SBML MML
aba00071 Acidobacteria bacterium SBML MML
abc00071 Acinetobacter baumannii ACICU SBML MML
abm00071 Acinetobacter baumannii SDF SBML MML
abo00071 Alcanivorax borkumensis SBML MML
abu00071 Arcobacter butzleri SBML MML
aby00071 Acinetobacter baumannii AYE SBML MML
acb00071 Acinetobacter baumannii ATCC 17978 SBML MML
ace00071 Acidothermus cellulolyticus SBML MML
aci00071 Acinetobacter sp. ADP1 SBML MML
acl00071 Acholeplasma laidlawii SBML MML
acr00071 Acidiphilium cryptum JF-5 SBML MML
ade00071 Anaeromyxobacter dehalogenans 2CP-C SBML MML
aeh00071 Alkalilimnicola ehrlichei SBML MML
afm00071 Aspergillus fumigatus SBML MML
afu00071 Archaeoglobus fulgidus SBML MML
afw00071 Anaeromyxobacter sp. Fw109-5 SBML MML
aga00071 Anopheles gambiae (mosquito) SBML MML
ago00071 Ashbya gossypii (Eremothecium gossypii) SBML MML
aha00071 Aeromonas hydrophila SBML MML
ajs00071 Acidovorax sp. JS42 SBML MML
ama00071 Anaplasma marginale St. Maries SBML MML
amr00071 Acaryochloris marina SBML MML
amt00071 Alkaliphilus metalliredigens SBML MML
ana00071 Anabaena sp. PCC7120 SBML MML
ang00071 Aspergillus niger SBML MML
ani00071 Aspergillus nidulans SBML MML
aoe00071 Alkaliphilus oremlandii SBML MML
aor00071 Aspergillus oryzae SBML MML
apa00071 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
ape00071 Aeropyrum pernix SBML MML
apj00071 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
apl00071 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
art00071 Arthrobacter sp. FB24 SBML MML
asa00071 Aeromonas salmonicida SBML MML
asu00071 Actinobacillus succinogenes SBML MML
atc00071 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00071 Arabidopsis thaliana (thale cress) SBML MML
atu00071 Agrobacterium tumefaciens C58 SBML MML
ava00071 Anabaena variabilis SBML MML
azc00071 Azorhizobium caulinodans SBML MML
azo00071 Azoarcus sp. BH72 SBML MML
baa00071 Bacillus anthracis A2012 SBML MML
bac00071 Burkholderia ambifaria MC40-6 SBML MML
bad00071 Bifidobacterium adolescentis SBML MML
baf00071 Borrelia afzelii SBML MML
bam00071 Burkholderia cepacia SBML MML
ban00071 Bacillus anthracis Ames SBML MML
bar00071 Bacillus anthracis Ames 0581 SBML MML
bat00071 Bacillus anthracis Sterne SBML MML
bav00071 Bordetella avium SBML MML
bay00071 Bacillus amyloliquefaciens SBML MML
bba00071 Bdellovibrio bacteriovorus SBML MML
bbk00071 Bartonella bacilliformis SBML MML
bbr00071 Bordetella bronchiseptica SBML MML
bbt00071 Bradyrhizobium sp. BTAi1 SBML MML
bca00071 Bacillus cereus ATCC 10987 SBML MML
bce00071 Bacillus cereus ATCC 14579 SBML MML
bch00071 Burkholderia cenocepacia HI2424 SBML MML
bcl00071 Bacillus clausii SBML MML
bcm00071 Burkholderia cenocepacia MC0-3 SBML MML
bcn00071 Burkholderia cenocepacia AU1054 SBML MML
bcs00071 Brucella canis SBML MML
bcy00071 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00071 Bacillus cereus ZK SBML MML
bfr00071 Bacteroides fragilis YCH46 SBML MML
bga00071 Borrelia garinii SBML MML
bha00071 Bacillus halodurans SBML MML
bhe00071 Bartonella henselae SBML MML
bid00071 Beijerinckia indica SBML MML
bja00071 Bradyrhizobium japonicum SBML MML
bld00071 Bacillus licheniformis DSM13 SBML MML
bli00071 Bacillus licheniformis ATCC 14580 SBML MML
blj00071 Bifidobacterium longum DJO10A SBML MML
blo00071 Bifidobacterium longum NCC2705 SBML MML
bma00071 Burkholderia mallei ATCC 23344 SBML MML
bmb00071 Brucella abortus 9-941 SBML MML
bmc00071 Brucella abortus S19 SBML MML
bme00071 Brucella melitensis 16M SBML MML
bmf00071 Brucella melitensis biovar Abortus SBML MML
bml00071 Burkholderia mallei NCTC 10229 SBML MML
bmn00071 Burkholderia mallei NCTC 10247 SBML MML
bms00071 Brucella suis 1330 SBML MML
bmt00071 Brucella suis ATCC 23445 SBML MML
bmu00071 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00071 Burkholderia mallei SAVP1 SBML MML
bmy00071 Brugia malayi (filaria) SBML MML
bov00071 Brucella ovis SBML MML
bpa00071 Bordetella parapertussis SBML MML
bpd00071 Burkholderia pseudomallei 668 SBML MML
bpe00071 Bordetella pertussis SBML MML
bph00071 Burkholderia phymatum SBML MML
bpl00071 Burkholderia pseudomallei 1106a SBML MML
bpm00071 Burkholderia pseudomallei 1710b SBML MML
bps00071 Burkholderia pseudomallei K96243 SBML MML
bpt00071 Bordetella petrii SBML MML
bpu00071 Bacillus pumilus SBML MML
bqu00071 Bartonella quintana SBML MML
bra00071 Bradyrhizobium sp. ORS278 SBML MML
bsu00071 Bacillus subtilis SBML MML
bta00071 Bos taurus (cow) SBML MML
bte00071 Burkholderia thailandensis SBML MML
btk00071 Bacillus thuringiensis 97-27 SBML MML
btl00071 Bacillus thuringiensis Al Hakam SBML MML
btr00071 Bartonella tribocorum SBML MML
bur00071 Burkholderia sp. 383 SBML MML
bvi00071 Burkholderia vietnamiensis SBML MML
bvu00071 Bacteroides vulgatus SBML MML
bwe00071 Bacillus weihenstephanensis SBML MML
bxe00071 Burkholderia xenovorans SBML MML
cac00071 Clostridium acetobutylicum SBML MML
cak00071 Caulobacter sp. K31 SBML MML
cal00071 Candida albicans SBML MML
cau00071 Chloroflexus aurantiacus SBML MML
cba00071 Clostridium botulinum A ATCC 19397 SBML MML
cbb00071 Clostridium botulinum B1 Okra SBML MML
cbd00071 Coxiella burnetii Dugway 5J108-111 SBML MML
cbe00071 Clostridium beijerinckii SBML MML
cbf00071 Clostridium botulinum F Langeland SBML MML
cbh00071 Clostridium botulinum A Hall SBML MML
cbk00071 Clostridium botulinum B Eklund 17B SBML MML
cbl00071 Clostridium botulinum A3 Loch Maree SBML MML
cbo00071 Clostridium botulinum A ATCC 3502 SBML MML
cbs00071 Coxiella burnetii RSA 331 SBML MML
cbu00071 Coxiella burnetii RSA 493 SBML MML
cch00071 Chlorobium chlorochromatii SBML MML
cco00071 Campylobacter concisus 13826 SBML MML
ccr00071 Caulobacter crescentus CB15 SBML MML
ccv00071 Campylobacter curvus SBML MML
cdf00071 Clostridium difficile SBML MML
cdi00071 Corynebacterium diphtheriae SBML MML
cef00071 Corynebacterium efficiens SBML MML
cel00071 Caenorhabditis elegans (nematode) SBML MML
cfa00071 Canis familiaris (dog) SBML MML
cgb00071 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00071 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00071 Candida glabrata SBML MML
cgt00071 Corynebacterium glutamicum R SBML MML
cha00071 Campylobacter hominis ATCC BAA-381 SBML MML
cho00071 Cryptosporidium hominis SBML MML
chu00071 Cytophaga hutchinsonii SBML MML
chy00071 Carboxydothermus hydrogenoformans SBML MML
cja00071 Cellvibrio japonicus SBML MML
cjk00071 Corynebacterium jeikeium SBML MML
cju00071 Campylobacter jejuni 81116 SBML MML
ckl00071 Clostridium kluyveri DSM 555 SBML MML
cko00071 Citrobacter koseri ATCC BAA-895 SBML MML
cma00071 Caldivirga maquilingensis SBML MML
cme00071 Cyanidioschyzon merolae SBML MML
cmi00071 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00071 Clavibacter michiganensis subsp. sepedonicus SBML MML
cnb00071 Cryptococcus neoformans B-3501A SBML MML
cne00071 Cryptococcus neoformans JEC21 SBML MML
cno00071 Clostridium novyi SBML MML
cpb00071 Chlorobium phaeobacteroides BS1 SBML MML
cpe00071 Clostridium perfringens 13 SBML MML
cpf00071 Clostridium perfringens ATCC 13124 SBML MML
cpr00071 Clostridium perfringens SM101 SBML MML
cps00071 Colwellia psychrerythraea SBML MML
cpv00071 Cryptosporidium parvum SBML MML
cre00071 Chlamydomonas reinhardtii SBML MML
csa00071 Chromohalobacter salexigens SBML MML
csc00071 Caldicellulosiruptor saccharolyticus SBML MML
ctc00071 Clostridium tetani E88 SBML MML
cte00071 Chlorobaculum tepidum SBML MML
cth00071 Clostridium thermocellum SBML MML
cti00071 Cupriavidus taiwanensis SBML MML
cur00071 Corynebacterium urealyticum SBML MML
cvi00071 Chromobacterium violaceum SBML MML
cya00071 Cyanobacteria Yellowstone A-Prime SBML MML
cyb00071 Cyanobacteria Yellowstone B-Prime SBML MML
cyt00071 Cyanothece sp. ATCC 51142 SBML MML
daag00071 (Undocumented) SBML MML
dac00071 Delftia acidovorans SBML MML
dame00071 (Undocumented) SBML MML
dar00071 Dechloromonas aromatica SBML MML
dbmo00071 Bombyx mori (silkmoth) SBML MML
dcbr00071 (Undocumented) SBML MML
dcin00071 (Undocumented) SBML MML
dde00071 Desulfovibrio desulfuricans G20 SBML MML
ddi00071 Dictyostelium discoideum SBML MML
decb00071 (Undocumented) SBML MML
dfru00071 Fugu rubripes (Japanese puffer fish) SBML MML
dge00071 Deinococcus geothermalis SBML MML
dha00071 Debaryomyces hansenii SBML MML
dkwa00071 Kluyveromyces waltii SBML MML
dme00071 Drosophila melanogaster (fruit fly) SBML MML
dno00071 Dichelobacter nodosus SBML MML
dol00071 Candidatus Desulfococcus oleovorans SBML MML
dola00071 Oryzias latipes (Japanese medaka) SBML MML
dota00071 Ostreococcus tauri SBML MML
dpkn00071 (Undocumented) SBML MML
dpo00071 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00071 (Undocumented) SBML MML
dps00071 Desulfotalea psychrophila SBML MML
dptm00071 (Undocumented) SBML MML
dra00071 Deinococcus radiodurans SBML MML
dre00071 Danio rerio (zebrafish) SBML MML
drm00071 Desulfotomaculum reducens SBML MML
dsba00071 Saccharomyces bayanus SBML MML
dsh00071 Dinoroseobacter shibae SBML MML
dsmi00071 Saccharomyces mikatae SBML MML
dspd00071 (Undocumented) SBML MML
dsy00071 Desulfitobacterium hafniense Y51 SBML MML
dtni00071 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00071 (Undocumented) SBML MML
dvl00071 Desulfovibrio vulgaris DP4 SBML MML
dvu00071 Desulfovibrio vulgaris Hildenborough SBML MML
dvvi00071 (Undocumented) SBML MML
eacp00071 (Undocumented) SBML MML
eath00071 Arabidopsis thaliana (thale cress) (EST) SBML MML
eba00071 Aromatoleum aromaticum EbN1 SBML MML
ebna00071 Brassica napus (rape) (EST) SBML MML
ebvl00071 Beta vulgaris (beet) (EST) SBML MML
eca00071 Erwinia carotovora SBML MML
ecan00071 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00071 Escherichia coli CFT073 (UPEC) SBML MML
ecd00071 Escherichia coli K-12 DH10B SBML MML
ece00071 Escherichia coli O157 EDL933 (EHEC) SBML MML
eci00071 Escherichia coli UTI89 (UPEC) SBML MML
ecj00071 Escherichia coli K-12 W3110 SBML MML
ecl00071 Escherichia coli ATCC 8739 SBML MML
ecm00071 Escherichia coli SECEC SBML MML
eco00071 Escherichia coli K-12 MG1655 SBML MML
ecp00071 Escherichia coli 536 (UPEC) SBML MML
ecs00071 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00071 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00071 Ciona savignyi (EST) SBML MML
ecu00071 Encephalitozoon cuniculi SBML MML
ecv00071 Escherichia coli APEC O1 SBML MML
ecw00071 Escherichia coli E24377A SBML MML
ecx00071 Escherichia coli HS SBML MML
eees00071 Euphorbia esula (leafy spurge) (EST) SBML MML
efa00071 Enterococcus faecalis SBML MML
efar00071 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00071 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00071 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00071 Glycine max (soybean) (EST) SBML MML
egra00071 Gossypium raimondii (EST) SBML MML
ehan00071 Helianthus annuus (sunflower) (EST) SBML MML
ehi00071 Entamoeba histolytica SBML MML
ehvu00071 Hordeum vulgare (barley) (EST) SBML MML
eini00071 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00071 Erythrobacter litoralis SBML MML
elja00071 Lotus japonicus (lotus) (EST) SBML MML
elpe00071 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00071 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00071 Lactuca sativa (lettuce) (EST) SBML MML
elvi00071 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00071 Manihot esculenta (cassava) (EST) SBML MML
emte00071 Molgula tectiformis (EST) SBML MML
emtr00071 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00071 Nicotiana benthamiana (EST) SBML MML
ent00071 Enterobacter sp. 638 SBML MML
enta00071 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00071 Oryza sativa (rice) (EST) SBML MML
eosi00071 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00071 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00071 Picea glauca (white spruce) (EST) SBML MML
epop00071 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00071 (Undocumented) SBML MML
eppi00071 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00071 Physcomitrella patens subsp. patens (EST) SBML MML
epps00071 Prunus persica (peach) (EST) SBML MML
epsi00071 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00071 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00071 Populus tremula (European aspen) (EST) SBML MML
esa00071 Enterobacter sakazakii SBML MML
esbi00071 Sorghum bicolor (sorghum) (EST) SBML MML
esi00071 Exiguobacterium sibiricum SBML MML
esja00071 Schistosoma japonicum (fluke) (EST) SBML MML
esly00071 Solanum lycopersicum (tomato) (EST) SBML MML
esof00071 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00071 (Undocumented) SBML MML
espu00071 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00071 Solanum tuberosum (potato) (EST) SBML MML
eta00071 Erwinia tasmaniensis SBML MML
etae00071 Triticum aestivum (wheat) (EST) SBML MML
evvi00071 Vitis vinifera (wine grape) (EST) SBML MML
ezel00071 (Undocumented) SBML MML
ezma00071 Zea mays (maize) (EST) SBML MML
fal00071 Frankia alni SBML MML
fgr00071 Fusarium graminearum SBML MML
fjo00071 Flavobacterium johnsoniae SBML MML
fma00071 Finegoldia magna SBML MML
fno00071 Fervidobacterium nodosum SBML MML
fnu00071 Fusobacterium nucleatum SBML MML
fph00071 Francisella philomiragia SBML MML
fps00071 Flavobacterium psychrophilum SBML MML
fra00071 Frankia sp. CcI3 SBML MML
fre00071 Frankia sp. EAN1pec SBML MML
fta00071 Francisella tularensis subsp. holarctica FTNF002-00 SBML MML
ftf00071 Francisella tularensis subsp. tularensis FSC 198 SBML MML
fth00071 Francisella tularensis subsp. holarctica OSU18 SBML MML
ftl00071 Francisella tularensis subsp. holarctica LVS SBML MML
ftm00071 Francisella tularensis subsp. mediasiatica FSC147 SBML MML
ftn00071 Francisella tularensis subsp. novicida U112 SBML MML
ftu00071 Francisella tularensis subsp. tularensis SCHU S4 SBML MML
ftw00071 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gbe00071 Granulobacter bethesdensis SBML MML
gdi00071 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00071 Gramella forsetii SBML MML
gga00071 Gallus gallus (chicken) SBML MML
gka00071 Geobacillus kaustophilus SBML MML
gla00071 Giardia lamblia SBML MML
glo00071 Geobacter lovleyi SBML MML
gme00071 Geobacter metallireducens SBML MML
gox00071 Gluconobacter oxydans SBML MML
gsu00071 Geobacter sulfurreducens SBML MML
gur00071 Geobacter uraniumreducens SBML MML
gvi00071 Gloeobacter violaceus SBML MML
hac00071 Helicobacter acinonychis SBML MML
hal00071 Halobacterium sp. NRC-1 SBML MML
har00071 Herminiimonas arsenicoxydans SBML MML
hau00071 Herpetosiphon aurantiacus SBML MML
hbu00071 Hyperthermus butylicus SBML MML
hch00071 Hahella chejuensis SBML MML
hha00071 Halorhodospira halophila SBML MML
hin00071 Haemophilus influenzae Rd KW20 (serotype d) SBML MML
hiq00071 Haemophilus influenzae PittGG SBML MML
hit00071 Haemophilus influenzae 86-028NP (nontypeable) SBML MML
hma00071 Haloarcula marismortui SBML MML
hmo00071 Heliobacterium modesticaldum SBML MML
hne00071 Hyphomonas neptunium SBML MML
hpa00071 Helicobacter pylori HPAG1 SBML MML
hpy00071 Helicobacter pylori 26695 SBML MML
hsa00071 Homo sapiens (human) SBML MML
hsl00071 Halobacterium salinarum R1 SBML MML
hsm00071 Haemophilus somnus 2336 SBML MML
hwa00071 Haloquadratum walsbyi SBML MML
iho00071 Ignicoccus hospitalis SBML MML
ilo00071 Idiomarina loihiensis SBML MML
jan00071 Jannaschia sp. CCS1 SBML MML
kcr00071 Candidatus Korarchaeum cryptofilum SBML MML
kla00071 Kluyveromyces lactis SBML MML
kpn00071 Klebsiella pneumoniae SBML MML
kra00071 Kineococcus radiotolerans SBML MML
krh00071 Kocuria rhizophila SBML MML
lac00071 Lactobacillus acidophilus SBML MML
lbc00071 Laccaria bicolor SBML MML
lbf00071 Leptospira biflexa serovar Patoc Patoc 1 (Ames) SBML MML
lbi00071 Leptospira biflexa serovar Patoc Patoc 1 (Paris) SBML MML
lbj00071 Leptospira borgpetersenii JB197 SBML MML
lbl00071 Leptospira borgpetersenii L550 SBML MML
lbr00071 Lactobacillus brevis SBML MML
lbu00071 Lactobacillus delbrueckii ATCC BAA-365 SBML MML
lca00071 Lactobacillus casei ATCC 334 SBML MML
lch00071 Leptothrix cholodnii SBML MML
lci00071 Leuconostoc citreum SBML MML
ldb00071 Lactobacillus delbrueckii ATCC 11842 SBML MML
lfe00071 Lactobacillus fermentum SBML MML
lga00071 Lactobacillus gasseri SBML MML
lhe00071 Lactobacillus helveticus SBML MML
lic00071 Leptospira interrogans serovar Copenhageni SBML MML
lil00071 Leptospira interrogans serovar lai SBML MML
lin00071 Listeria innocua SBML MML
ljo00071 Lactobacillus johnsonii SBML MML
lla00071 Lactococcus lactis subsp. lactis IL1403 SBML MML
llc00071 Lactococcus lactis subsp. cremoris SK11 SBML MML
llm00071 Lactococcus lactis subsp. cremoris MG1363 SBML MML
lma00071 Leishmania major SBML MML
lmf00071 Listeria monocytogenes F2365 SBML MML
lmo00071 Listeria monocytogenes EGD-e SBML MML
lpc00071 Legionella pneumophila Corby SBML MML
lpf00071 Legionella pneumophila Lens SBML MML
lpl00071 Lactobacillus plantarum WCFS1 SBML MML
lpn00071 Legionella pneumophila Philadelphia 1 SBML MML
lpp00071 Legionella pneumophila Paris SBML MML
lre00071 Lactobacillus reuteri DSM 20016 SBML MML
lsa00071 Lactobacillus sakei SBML MML
lsp00071 Lysinibacillus sphaericus SBML MML
lwe00071 Listeria welshimeri SLCC5334 SBML MML
lxx00071 Leifsonia xyli xyli CTCB07 SBML MML
mab00071 Mycobacterium abscessus ATCC 19977T SBML MML
mac00071 Methanosarcina acetivorans SBML MML
mae00071 Methanococcus aeolicus SBML MML
mag00071 Magnetospirillum magneticum SBML MML
maq00071 Marinobacter aquaeolei SBML MML
mar00071 Microcystis aeruginosa SBML MML
mav00071 Mycobacterium avium 104 SBML MML
mba00071 Methanosarcina barkeri SBML MML
mbb00071 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbn00071 Candidatus Methanoregula boonei SBML MML
mbo00071 Mycobacterium bovis AF2122/97 SBML MML
mbr00071 Monosiga brevicollis SBML MML
mbu00071 Methanococcoides burtonii SBML MML
mca00071 Methylococcus capsulatus SBML MML
mcc00071 Macaca mulatta (rhesus monkey) SBML MML
mdo00071 Monodelphis domestica (opossum) SBML MML
mem00071 Methanoculleus marisnigri SBML MML
mes00071 Mesorhizobium sp. BNC1 SBML MML
met00071 Methylobacterium sp. 4-46 SBML MML
mex00071 Methylobacterium extorquens SBML MML
mfa00071 Methylobacillus flagellatus SBML MML
mgi00071 Mycobacterium gilvum SBML MML
mgl00071 Malassezia globosa SBML MML
mgm00071 Magnetococcus sp. MC-1 SBML MML
mgr00071 Magnaporthe grisea SBML MML
mhu00071 Methanospirillum hungatei SBML MML
mja00071 Methanococcus jannaschii SBML MML
mjl00071 Mycobacterium sp. JLS SBML MML
mka00071 Methanopyrus kandleri SBML MML
mkm00071 Mycobacterium sp. KMS SBML MML
mla00071 Methanocorpusculum labreanum SBML MML
mle00071 Mycobacterium leprae TN SBML MML
mlo00071 Mesorhizobium loti SBML MML
mma00071 Methanosarcina mazei SBML MML
mmc00071 Mycobacterium sp. MCS SBML MML
mmi00071 Mycobacterium marinum M SBML MML
mmp00071 Methanococcus maripaludis S2 SBML MML
mmr00071 Maricaulis maris SBML MML
mms00071 Minibacterium massiliensis SBML MML
mmu00071 Mus musculus (mouse) SBML MML
mmw00071 Marinomonas sp. MWYL1 SBML MML
mmx00071 Methanococcus maripaludis C6 SBML MML
mmz00071 Methanococcus maripaludis C7 SBML MML
mpa00071 Mycobacterium avium paratuberculosis SBML MML
mpe00071 Mycoplasma penetrans SBML MML
mpt00071 Methylibium petroleiphilum SBML MML
mra00071 Mycobacterium tuberculosis H37Ra SBML MML
mrd00071 Methylobacterium radiotolerans SBML MML
mse00071 Metallosphaera sedula SBML MML
msi00071 Methanobrevibacter smithii ATCC 35061 SBML MML
msm00071 Mycobacterium smegmatis SBML MML
mst00071 Methanosphaera stadtmanae SBML MML
msu00071 Mannheimia succiniciproducens SBML MML
mta00071 Moorella thermoacetica SBML MML
mtc00071 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00071 Mycobacterium tuberculosis F11 SBML MML
mth00071 Methanobacterium thermoautotrophicum SBML MML
mtp00071 Methanosaeta thermophila SBML MML
mtu00071 Mycobacterium tuberculosis H37Rv SBML MML
mul00071 Mycobacterium ulcerans SBML MML
mva00071 Mycobacterium vanbaalenii SBML MML
mvn00071 Methanococcus vannielii SBML MML
mxa00071 Myxococcus xanthus SBML MML
nar00071 Novosphingobium aromaticivorans SBML MML
nca00071 Nocardioides sp. JS614 SBML MML
ncr00071 Neurospora crassa SBML MML
net00071 Nitrosomonas eutropha SBML MML
neu00071 Nitrosomonas europaea SBML MML
nfa00071 Nocardia farcinica SBML MML
ngo00071 Neisseria gonorrhoeae SBML MML
nha00071 Nitrobacter hamburgensis SBML MML
nma00071 Neisseria meningitidis Z2491 (serogroup A) SBML MML
nmc00071 Neisseria meningitidis FAM18 (serogroup C) SBML MML
nme00071 Neisseria meningitidis MC58 (serogroup B) SBML MML
nmn00071 Neisseria meningitidis 053442 (serogroup C) SBML MML
nmr00071 Nitrosopumilus maritimus SBML MML
nmu00071 Nitrosospira multiformis SBML MML
noc00071 Nitrosococcus oceani SBML MML
nph00071 Natronomonas pharaonis SBML MML
npu00071 Nostoc punctiforme SBML MML
nve00071 Nematostella vectensis (sea anemone) SBML MML
nwi00071 Nitrobacter winogradskyi SBML MML
oaa00071 Ornithorhynchus anatinus (platypus) SBML MML
oan00071 Ochrobactrum anthropi SBML MML
oih00071 Oceanobacillus iheyensis SBML MML
olu00071 Ostreococcus lucimarinus SBML MML
ooe00071 Oenococcus oeni SBML MML
osa00071 Oryza sativa japonica (Japanese rice) SBML MML
ote00071 Opitutus terrae SBML MML
pab00071 Pyrococcus abyssi SBML MML
pac00071 Propionibacterium acnes SBML MML
pae00071 Pseudomonas aeruginosa PAO1 SBML MML
pai00071 Pyrobaculum aerophilum SBML MML
pan00071 Podospora anserina SBML MML
pap00071 Pseudomonas aeruginosa PA7 SBML MML
par00071 Psychrobacter arcticum SBML MML
pas00071 Pyrobaculum arsenaticum SBML MML
pat00071 Pseudoalteromonas atlantica SBML MML
pau00071 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pca00071 Pelobacter carbinolicus SBML MML
pcl00071 Pyrobaculum calidifontis SBML MML
pcr00071 Psychrobacter cryohalolentis SBML MML
pde00071 Paracoccus denitrificans SBML MML
pdi00071 Parabacteroides distasonis SBML MML
pen00071 Pseudomonas entomophila SBML MML
pfa00071 Plasmodium falciparum 3D7 SBML MML
pfl00071 Pseudomonas fluorescens Pf-5 SBML MML
pfo00071 Pseudomonas fluorescens Pf0-1 SBML MML
pfu00071 Pyrococcus furiosus SBML MML
pgn00071 Porphyromonas gingivalis ATCC 33277 SBML MML
pha00071 Pseudoalteromonas haloplanktis SBML MML
pho00071 Pyrococcus horikoshii SBML MML
pic00071 Pichia stipitis SBML MML
pin00071 Psychromonas ingrahamii SBML MML
pis00071 Pyrobaculum islandicum SBML MML
pla00071 Parvibaculum lavamentivorans SBML MML
plu00071 Photorhabdus luminescens SBML MML
pma00071 Prochlorococcus marinus SS120 SBML MML
pmb00071 Prochlorococcus marinus AS9601 SBML MML
pmc00071 Prochlorococcus marinus MIT 9515 SBML MML
pme00071 Prochlorococcus marinus NATL1A SBML MML
pmf00071 Prochlorococcus marinus MIT 9303 SBML MML
pmg00071 Prochlorococcus marinus MIT 9301 SBML MML
pmh00071 Prochlorococcus marinus MIT 9215 SBML MML
pmi00071 Prochlorococcus marinus MIT9312 SBML MML
pmj00071 Prochlorococcus marinus MIT 9211 SBML MML
pmm00071 Prochlorococcus marinus MED4 SBML MML
pmn00071 Prochlorococcus marinus NATL2A SBML MML
pmo00071 Petrotoga mobilis SBML MML
pmt00071 Prochlorococcus marinus MIT9313 SBML MML
pmu00071 Pasteurella multocida SBML MML
pmy00071 Pseudomonas mendocina SBML MML
pna00071 Polaromonas naphthalenivorans SBML MML
pne00071 Polynucleobacter necessarius SBML MML
pnu00071 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00071 Polaromonas sp. JS666 SBML MML
ppd00071 Pelobacter propionicus SBML MML
ppf00071 Pseudomonas putida F1 SBML MML
ppg00071 Pseudomonas putida GB-1 SBML MML
ppp00071 Physcomitrella patens subsp. patens SBML MML
ppr00071 Photobacterium profundum SBML MML
ppu00071 Pseudomonas putida KT2440 SBML MML
ppw00071 Pseudomonas putida W619 SBML MML
prw00071 Psychrobacter sp. PRwf-1 SBML MML
psa00071 Pseudomonas stutzeri SBML MML
psb00071 Pseudomonas syringae pv. syringae B728a SBML MML
psp00071 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00071 Pseudomonas syringae pv. tomato DC3000 SBML MML
pth00071 Pelotomaculum thermopropionicum SBML MML
pto00071 Picrophilus torridus SBML MML
ptr00071 Pan troglodytes (chimpanzee) SBML MML
pub00071 Candidatus Pelagibacter ubique SBML MML
pvi00071 Prosthecochloris vibrioformis SBML MML
pyo00071 Plasmodium yoelii SBML MML
rak00071 Rickettsia akari SBML MML
rba00071 Rhodopirellula baltica SBML MML
rbe00071 Rickettsia bellii RML369-C SBML MML
rbo00071 Rickettsia bellii OSU 85-389 SBML MML
rca00071 Roseiflexus castenholzii DSM13941 SBML MML
rci00071 Uncultured methanogenic archaeon RC-I SBML MML
rco00071 Rickettsia conorii SBML MML
rde00071 Roseobacter denitrificans SBML MML
rec00071 Rhizobium etli CIAT 652 SBML MML
reh00071 Ralstonia eutropha H16 SBML MML
ret00071 Rhizobium etli CFN 42 SBML MML
reu00071 Ralstonia eutropha JMP134 SBML MML
rfe00071 Rickettsia felis SBML MML
rfr00071 Rhodoferax ferrireducens SBML MML
rha00071 Rhodococcus sp. RHA1 SBML MML
rle00071 Rhizobium leguminosarum SBML MML
rme00071 Ralstonia metallidurans SBML MML
rno00071 Rattus norvegicus (rat) SBML MML
rpa00071 Rhodopseudomonas palustris CGA009 SBML MML
rpb00071 Rhodopseudomonas palustris HaA2 SBML MML
rpc00071 Rhodopseudomonas palustris BisB18 SBML MML
rpd00071 Rhodopseudomonas palustris BisB5 SBML MML
rpe00071 Rhodopseudomonas palustris BisA53 SBML MML
rpr00071 Rickettsia prowazekii SBML MML
rpt00071 Rhodopseudomonas palustris TIE-1 SBML MML
rrj00071 Rickettsia rickettsii Iowa SBML MML
rrs00071 Roseiflexus sp. RS-1 SBML MML
rru00071 Rhodospirillum rubrum SBML MML
rsa00071 Renibacterium salmoninarum SBML MML
rsh00071 Rhodobacter sphaeroides ATCC 17029 SBML MML
rso00071 Ralstonia solanacearum SBML MML
rsp00071 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00071 Rhodobacter sphaeroides ATCC 17025 SBML MML
rty00071 Rickettsia typhi SBML MML
rxy00071 Rubrobacter xylanophilus SBML MML
saa00071 Staphylococcus aureus USA300 SBML MML
sab00071 Staphylococcus aureus RF122 SBML MML
sac00071 Staphylococcus aureus COL SBML MML
sae00071 Staphylococcus aureus Newman SBML MML
sag00071 Streptococcus agalactiae 2603 (serotype V) SBML MML
sah00071 Staphylococcus aureus JH1 SBML MML
sai00071 Sulfolobus acidocaldarius SBML MML
saj00071 Staphylococcus aureus JH9 SBML MML
sak00071 Streptococcus agalactiae A909 (serotype Ia) SBML MML
sal00071 Sphingopyxis alaskensis SBML MML
sam00071 Staphylococcus aureus MW2 SBML MML
san00071 Streptococcus agalactiae NEM316 (serotype III) SBML MML
sao00071 Staphylococcus aureus NCTC8325 SBML MML
saq00071 Salinispora arenicola SBML MML
sar00071 Staphylococcus aureus MRSA252 SBML MML
sas00071 Staphylococcus aureus MSSA476 SBML MML
sat00071 Syntrophus aciditrophicus SBML MML
sau00071 Staphylococcus aureus N315 SBML MML
sav00071 Staphylococcus aureus Mu50 SBML MML
saw00071 Staphylococcus aureus Mu3 SBML MML
sax00071 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00071 Shewanella amazonensis SBML MML
sbc00071 Shigella boydii CDC 3083-94 SBML MML
sbl00071 Shewanella baltica OS155 SBML MML
sbm00071 Shewanella baltica OS185 SBML MML
sbn00071 Shewanella baltica OS195 SBML MML
sbo00071 Shigella boydii Sb227 SBML MML
sce00071 Saccharomyces cerevisiae SBML MML
scl00071 Sorangium cellulosum SBML MML
sco00071 Streptomyces coelicolor SBML MML
sde00071 Saccharophagus degradans SBML MML
sdn00071 Shewanella denitrificans SBML MML
sdy00071 Shigella dysenteriae SBML MML
sec00071 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00071 Saccharopolyspora erythraea SBML MML
sep00071 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00071 Staphylococcus epidermidis RP62A SBML MML
ses00071 Salmonella enterica subsp. arizonae SBML MML
sfl00071 Shigella flexneri 301 (serotype 2a) SBML MML
sfr00071 Shewanella frigidimarina SBML MML
sfu00071 Syntrophobacter fumaroxidans SBML MML
sfv00071 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00071 Shigella flexneri 2457T (serotype 2a) SBML MML
sgo00071 Streptococcus gordonii SBML MML
sgr00071 Streptomyces griseus SBML MML
sha00071 Staphylococcus haemolyticus SBML MML
she00071 Shewanella sp. MR-4 SBML MML
shl00071 Shewanella halifaxensis SBML MML
shm00071 Shewanella sp. MR-7 SBML MML
shn00071 Shewanella sp. ANA-3 SBML MML
shw00071 Shewanella sp. W3-18-1 SBML MML
sil00071 Ruegeria pomeroyi SBML MML
sit00071 Silicibacter sp. TM1040 SBML MML
slo00071 Shewanella loihica SBML MML
sma00071 Streptomyces avermitilis SBML MML
smd00071 Sinorhizobium medicae SBML MML
sme00071 Sinorhizobium meliloti SBML MML
sml00071 Stenotrophomonas maltophilia SBML MML
smr00071 Staphylothermus marinus SBML MML
smu00071 Streptococcus mutans SBML MML
son00071 Shewanella oneidensis SBML MML
spa00071 Streptococcus pyogenes MGAS10394 (serotype M6) SBML MML
spb00071 Streptococcus pyogenes MGAS6180 (serotype M28) SBML MML
spc00071 Shewanella putrefaciens SBML MML
spd00071 Streptococcus pneumoniae D39 SBML MML
spe00071 Serratia proteamaculans SBML MML
spf00071 Streptococcus pyogenes Manfredo (serotype M5) SBML MML
spg00071 Streptococcus pyogenes MGAS315 (serotype M3) SBML MML
sph00071 Streptococcus pyogenes MGAS10270 (serotype M2) SBML MML
spi00071 Streptococcus pyogenes MGAS10750 (serotype M4) SBML MML
spj00071 Streptococcus pyogenes MGAS2096 (serotype M12) SBML MML
spk00071 Streptococcus pyogenes MGAS9429 (serotype M12) SBML MML
spl00071 Shewanella pealeana SBML MML
spm00071 Streptococcus pyogenes MGAS8232 (serotype M18) SBML MML
spn00071 Streptococcus pneumoniae TIGR4 SBML MML
spo00071 Schizosaccharomyces pombe SBML MML
spq00071 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spr00071 Streptococcus pneumoniae R6 SBML MML
sps00071 Streptococcus pyogenes SSI-1 (serotype M3) SBML MML
spt00071 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spu00071 Strongylocentrotus purpuratus (purple sea urchin) SBML MML
spv00071 Streptococcus pneumoniae Hungary19A 6 SBML MML
spw00071 Streptococcus pneumoniae CGSP14 (serotype 14) SBML MML
spy00071 Streptococcus pyogenes SF370 (serotype M1) SBML MML
spz00071 Streptococcus pyogenes MGAS5005 (serotype M1) SBML MML
sru00071 Salinibacter ruber SBML MML
ssa00071 Streptococcus sanguinis SBML MML
ssc00071 Sus scrofa (pig) SBML MML
sse00071 Shewanella sediminis SBML MML
ssn00071 Shigella sonnei SBML MML
sso00071 Sulfolobus solfataricus SBML MML
ssp00071 Staphylococcus saprophyticus SBML MML
ssu00071 Streptococcus suis 05ZYH33 SBML MML
ssv00071 Streptococcus suis 98HAH33 SBML MML
stc00071 Streptococcus thermophilus CNRZ1066 SBML MML
ste00071 Streptococcus thermophilus LMD-9 SBML MML
sth00071 Symbiobacterium thermophilum SBML MML
stl00071 Streptococcus thermophilus LMG18311 SBML MML
stm00071 Salmonella typhimurium LT2 SBML MML
sto00071 Sulfolobus tokodaii SBML MML
stp00071 Salinispora tropica SBML MML
stt00071 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00071 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sun00071 Sulfurovum sp. NBC37-1 SBML MML
sus00071 Solibacter usitatus SBML MML
swd00071 Shewanella woodyi ATCC 51908 SBML MML
swi00071 Sphingomonas wittichii SBML MML
swo00071 Syntrophomonas wolfei SBML MML
syc00071 Synechococcus elongatus PCC6301 SBML MML
syd00071 Synechococcus sp. CC9605 SBML MML
sye00071 Synechococcus sp. CC9902 SBML MML
syf00071 Synechococcus elongatus PCC7942 SBML MML
syg00071 Synechococcus sp. CC9311 SBML MML
syn00071 Synechocystis sp. PCC6803 SBML MML
syp00071 Synechococcus sp. PCC7002 SBML MML
syr00071 Synechococcus sp. RCC307 SBML MML
syw00071 Synechococcus sp. WH8102 SBML MML
syx00071 Synechococcus sp. WH7803 SBML MML
tac00071 Thermoplasma acidophilum SBML MML
tbd00071 Thiobacillus denitrificans SBML MML
tbr00071 Trypanosoma brucei SBML MML
tca00071 Tribolium castaneum (red flour beetle) SBML MML
tcr00071 Trypanosoma cruzi SBML MML
tcx00071 Thiomicrospira crunogena SBML MML
tde00071 Treponema denticola SBML MML
tel00071 Thermosynechococcus elongatus SBML MML
ter00071 Trichodesmium erythraeum SBML MML
tet00071 Tetrahymena thermophila SBML MML
tfu00071 Thermobifida fusca SBML MML
tko00071 Thermococcus kodakaraensis SBML MML
tle00071 Thermotoga lettingae SBML MML
tme00071 Thermosipho melanesiensis SBML MML
tne00071 Thermoproteus neutrophilus SBML MML
tpe00071 Thermofilum pendens SBML MML
tte00071 Thermoanaerobacter tengcongensis SBML MML
tth00071 Thermus thermophilus HB27 SBML MML
ttj00071 Thermus thermophilus HB8 SBML MML
tva00071 Trichomonas vaginalis SBML MML
tvo00071 Thermoplasma volcanium SBML MML
uma00071 Ustilago maydis SBML MML
vch00071 Vibrio cholerae O1 SBML MML
vco00071 Vibrio cholerae O395 SBML MML
vei00071 Verminephrobacter eiseniae SBML MML
vfi00071 Vibrio fischeri SBML MML
vha00071 Vibrio harveyi SBML MML
vpa00071 Vibrio parahaemolyticus SBML MML
vpo00071 Vanderwaltozyma polyspora SBML MML
vvu00071 Vibrio vulnificus CMCP6 SBML MML
vvy00071 Vibrio vulnificus YJ016 SBML MML
xac00071 Xanthomonas axonopodis SBML MML
xau00071 Xanthobacter autotrophicus SBML MML
xcb00071 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00071 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00071 Xanthomonas campestris pv. vesicatoria SBML MML
xfa00071 Xylella fastidiosa 9a5c SBML MML
xfm00071 Xylella fastidiosa M12 SBML MML
xfn00071 Xylella fastidiosa M23 SBML MML
xft00071 Xylella fastidiosa Temecula1 SBML MML
xla00071 Xenopus laevis (African clawed frog) SBML MML
xom00071 Xanthomonas oryzae MAFF311018 SBML MML
xoo00071 Xanthomonas oryzae KACC10331 SBML MML
xtr00071 Xenopus tropicalis (western clawed frog) SBML MML
yen00071 Yersinia enterocolitica SBML MML
yli00071 Yarrowia lipolytica SBML MML
ypa00071 Yersinia pestis Antiqua SBML MML
ype00071 Yersinia pestis CO92 SBML MML
ypg00071 Yersinia pestis Angola SBML MML
ypi00071 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00071 Yersinia pestis KIM SBML MML
ypm00071 Yersinia pestis Mediaevails SBML MML
ypn00071 Yersinia pestis Nepal516 SBML MML
ypp00071 Yersinia pestis Pestoides SBML MML
yps00071 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00071 Yersinia pseudotuberculosis YPIII SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.