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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00720: (Undocumented)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aae00720 Aquifex aeolicus SBML MML
aau00720 Arthrobacter aurescens SBML MML
aav00720 Acidovorax avenae SBML MML
aba00720 Acidobacteria bacterium SBML MML
abc00720 Acinetobacter baumannii ACICU SBML MML
abm00720 Acinetobacter baumannii SDF SBML MML
abo00720 Alcanivorax borkumensis SBML MML
abu00720 Arcobacter butzleri SBML MML
aby00720 Acinetobacter baumannii AYE SBML MML
acb00720 Acinetobacter baumannii ATCC 17978 SBML MML
ace00720 Acidothermus cellulolyticus SBML MML
aci00720 Acinetobacter sp. ADP1 SBML MML
acr00720 Acidiphilium cryptum JF-5 SBML MML
ade00720 Anaeromyxobacter dehalogenans 2CP-C SBML MML
aeh00720 Alkalilimnicola ehrlichei SBML MML
afm00720 Aspergillus fumigatus SBML MML
afu00720 Archaeoglobus fulgidus SBML MML
afw00720 Anaeromyxobacter sp. Fw109-5 SBML MML
aga00720 Anopheles gambiae (mosquito) SBML MML
ago00720 Ashbya gossypii (Eremothecium gossypii) SBML MML
aha00720 Aeromonas hydrophila SBML MML
ajs00720 Acidovorax sp. JS42 SBML MML
ama00720 Anaplasma marginale St. Maries SBML MML
amr00720 Acaryochloris marina SBML MML
amt00720 Alkaliphilus metalliredigens SBML MML
ana00720 Anabaena sp. PCC7120 SBML MML
ang00720 Aspergillus niger SBML MML
ani00720 Aspergillus nidulans SBML MML
aoe00720 Alkaliphilus oremlandii SBML MML
aor00720 Aspergillus oryzae SBML MML
apa00720 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
ape00720 Aeropyrum pernix SBML MML
aph00720 Anaplasma phagocytophilum SBML MML
apj00720 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
apl00720 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
art00720 Arthrobacter sp. FB24 SBML MML
asa00720 Aeromonas salmonicida SBML MML
asu00720 Actinobacillus succinogenes SBML MML
atc00720 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00720 Arabidopsis thaliana (thale cress) SBML MML
atu00720 Agrobacterium tumefaciens C58 SBML MML
ava00720 Anabaena variabilis SBML MML
azc00720 Azorhizobium caulinodans SBML MML
azo00720 Azoarcus sp. BH72 SBML MML
baa00720 Bacillus anthracis A2012 SBML MML
bac00720 Burkholderia ambifaria MC40-6 SBML MML
bad00720 Bifidobacterium adolescentis SBML MML
bam00720 Burkholderia cepacia SBML MML
ban00720 Bacillus anthracis Ames SBML MML
bar00720 Bacillus anthracis Ames 0581 SBML MML
bat00720 Bacillus anthracis Sterne SBML MML
bav00720 Bordetella avium SBML MML
bay00720 Bacillus amyloliquefaciens SBML MML
bba00720 Bdellovibrio bacteriovorus SBML MML
bbk00720 Bartonella bacilliformis SBML MML
bbr00720 Bordetella bronchiseptica SBML MML
bbt00720 Bradyrhizobium sp. BTAi1 SBML MML
bca00720 Bacillus cereus ATCC 10987 SBML MML
bce00720 Bacillus cereus ATCC 14579 SBML MML
bch00720 Burkholderia cenocepacia HI2424 SBML MML
bci00720 Baumannia cicadellinicola SBML MML
bcl00720 Bacillus clausii SBML MML
bcm00720 Burkholderia cenocepacia MC0-3 SBML MML
bcn00720 Burkholderia cenocepacia AU1054 SBML MML
bcs00720 Brucella canis SBML MML
bcy00720 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00720 Bacillus cereus ZK SBML MML
bfl00720 Candidatus Blochmannia floridanus SBML MML
bfr00720 Bacteroides fragilis YCH46 SBML MML
bfs00720 Bacteroides fragilis NCTC9343 SBML MML
bha00720 Bacillus halodurans SBML MML
bhe00720 Bartonella henselae SBML MML
bid00720 Beijerinckia indica SBML MML
bja00720 Bradyrhizobium japonicum SBML MML
bld00720 Bacillus licheniformis DSM13 SBML MML
bli00720 Bacillus licheniformis ATCC 14580 SBML MML
blj00720 Bifidobacterium longum DJO10A SBML MML
blo00720 Bifidobacterium longum NCC2705 SBML MML
bma00720 Burkholderia mallei ATCC 23344 SBML MML
bmb00720 Brucella abortus 9-941 SBML MML
bmc00720 Brucella abortus S19 SBML MML
bme00720 Brucella melitensis 16M SBML MML
bmf00720 Brucella melitensis biovar Abortus SBML MML
bml00720 Burkholderia mallei NCTC 10229 SBML MML
bmn00720 Burkholderia mallei NCTC 10247 SBML MML
bms00720 Brucella suis 1330 SBML MML
bmt00720 Brucella suis ATCC 23445 SBML MML
bmu00720 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00720 Burkholderia mallei SAVP1 SBML MML
bmy00720 Brugia malayi (filaria) SBML MML
bov00720 Brucella ovis SBML MML
bpa00720 Bordetella parapertussis SBML MML
bpd00720 Burkholderia pseudomallei 668 SBML MML
bpe00720 Bordetella pertussis SBML MML
bph00720 Burkholderia phymatum SBML MML
bpl00720 Burkholderia pseudomallei 1106a SBML MML
bpm00720 Burkholderia pseudomallei 1710b SBML MML
bpn00720 Candidatus Blochmannia pennsylvanicus SBML MML
bps00720 Burkholderia pseudomallei K96243 SBML MML
bpt00720 Bordetella petrii SBML MML
bpu00720 Bacillus pumilus SBML MML
bqu00720 Bartonella quintana SBML MML
bra00720 Bradyrhizobium sp. ORS278 SBML MML
bsu00720 Bacillus subtilis SBML MML
bta00720 Bos taurus (cow) SBML MML
bte00720 Burkholderia thailandensis SBML MML
bth00720 Bacteroides thetaiotaomicron SBML MML
btk00720 Bacillus thuringiensis 97-27 SBML MML
btl00720 Bacillus thuringiensis Al Hakam SBML MML
btr00720 Bartonella tribocorum SBML MML
bur00720 Burkholderia sp. 383 SBML MML
bvi00720 Burkholderia vietnamiensis SBML MML
bvu00720 Bacteroides vulgatus SBML MML
bwe00720 Bacillus weihenstephanensis SBML MML
bxe00720 Burkholderia xenovorans SBML MML
cab00720 Chlamydophila abortus SBML MML
cac00720 Clostridium acetobutylicum SBML MML
cak00720 Caulobacter sp. K31 SBML MML
cal00720 Candida albicans SBML MML
cau00720 Chloroflexus aurantiacus SBML MML
cba00720 Clostridium botulinum A ATCC 19397 SBML MML
cbb00720 Clostridium botulinum B1 Okra SBML MML
cbd00720 Coxiella burnetii Dugway 5J108-111 SBML MML
cbe00720 Clostridium beijerinckii SBML MML
cbf00720 Clostridium botulinum F Langeland SBML MML
cbh00720 Clostridium botulinum A Hall SBML MML
cbk00720 Clostridium botulinum B Eklund 17B SBML MML
cbl00720 Clostridium botulinum A3 Loch Maree SBML MML
cbo00720 Clostridium botulinum A ATCC 3502 SBML MML
cbs00720 Coxiella burnetii RSA 331 SBML MML
cbu00720 Coxiella burnetii RSA 493 SBML MML
cca00720 Chlamydophila caviae SBML MML
cch00720 Chlorobium chlorochromatii SBML MML
cco00720 Campylobacter concisus 13826 SBML MML
ccr00720 Caulobacter crescentus CB15 SBML MML
ccv00720 Campylobacter curvus SBML MML
cdf00720 Clostridium difficile SBML MML
cdi00720 Corynebacterium diphtheriae SBML MML
cef00720 Corynebacterium efficiens SBML MML
cel00720 Caenorhabditis elegans (nematode) SBML MML
cfa00720 Canis familiaris (dog) SBML MML
cfe00720 Chlamydophila felis SBML MML
cff00720 Campylobacter fetus SBML MML
cgb00720 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00720 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00720 Candida glabrata SBML MML
cgt00720 Corynebacterium glutamicum R SBML MML
cha00720 Campylobacter hominis ATCC BAA-381 SBML MML
cho00720 Cryptosporidium hominis SBML MML
chu00720 Cytophaga hutchinsonii SBML MML
chy00720 Carboxydothermus hydrogenoformans SBML MML
cja00720 Cellvibrio japonicus SBML MML
cjd00720 Campylobacter jejuni subsp. doylei 269.97 SBML MML
cje00720 Campylobacter jejuni NCTC11168 SBML MML
cjj00720 Campylobacter jejuni 81-176 SBML MML
cjk00720 Corynebacterium jeikeium SBML MML
cjr00720 Campylobacter jejuni RM1221 SBML MML
cju00720 Campylobacter jejuni 81116 SBML MML
ckl00720 Clostridium kluyveri DSM 555 SBML MML
cko00720 Citrobacter koseri ATCC BAA-895 SBML MML
cma00720 Caldivirga maquilingensis SBML MML
cme00720 Cyanidioschyzon merolae SBML MML
cmi00720 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00720 Clavibacter michiganensis subsp. sepedonicus SBML MML
cmu00720 Chlamydia muridarum SBML MML
cnb00720 Cryptococcus neoformans B-3501A SBML MML
cne00720 Cryptococcus neoformans JEC21 SBML MML
cno00720 Clostridium novyi SBML MML
cpa00720 Chlamydophila pneumoniae AR39 SBML MML
cpb00720 Chlorobium phaeobacteroides BS1 SBML MML
cph00720 Chlorobium phaeobacteroides DSM 266 SBML MML
cpj00720 Chlamydophila pneumoniae J138 SBML MML
cpn00720 Chlamydophila pneumoniae CWL029 SBML MML
cps00720 Colwellia psychrerythraea SBML MML
cpt00720 Chlamydophila pneumoniae TW183 SBML MML
cpv00720 Cryptosporidium parvum SBML MML
cpy00720 Clostridium phytofermentans SBML MML
cre00720 Chlamydomonas reinhardtii SBML MML
csa00720 Chromohalobacter salexigens SBML MML
csc00720 Caldicellulosiruptor saccharolyticus SBML MML
cta00720 Chlamydia trachomatis A/HAR-13 (serovar A) SBML MML
ctb00720 Chlamydia trachomatis 434/Bu SBML MML
ctc00720 Clostridium tetani E88 SBML MML
cte00720 Chlorobaculum tepidum SBML MML
cth00720 Clostridium thermocellum SBML MML
cti00720 Cupriavidus taiwanensis SBML MML
ctl00720 Chlamydia trachomatis L2b/UCH-1/proctitis SBML MML
ctr00720 Chlamydia trachomatis D/UW-3/CX (serovar D) SBML MML
cur00720 Corynebacterium urealyticum SBML MML
cvi00720 Chromobacterium violaceum SBML MML
cya00720 Cyanobacteria Yellowstone A-Prime SBML MML
cyb00720 Cyanobacteria Yellowstone B-Prime SBML MML
cyt00720 Cyanothece sp. ATCC 51142 SBML MML
daag00720 (Undocumented) SBML MML
dac00720 Delftia acidovorans SBML MML
dame00720 (Undocumented) SBML MML
dar00720 Dechloromonas aromatica SBML MML
dau00720 Candidatus Desulforudis audaxviator SBML MML
dbmo00720 Bombyx mori (silkmoth) SBML MML
dcbr00720 (Undocumented) SBML MML
dcin00720 (Undocumented) SBML MML
dde00720 Desulfovibrio desulfuricans G20 SBML MML
ddi00720 Dictyostelium discoideum SBML MML
deb00720 Dehalococcoides sp. BAV1 SBML MML
decb00720 (Undocumented) SBML MML
deh00720 Dehalococcoides sp. CBDB1 SBML MML
det00720 Dehalococcoides ethenogenes SBML MML
dfru00720 Fugu rubripes (Japanese puffer fish) SBML MML
dge00720 Deinococcus geothermalis SBML MML
dha00720 Debaryomyces hansenii SBML MML
dkwa00720 Kluyveromyces waltii SBML MML
dme00720 Drosophila melanogaster (fruit fly) SBML MML
dno00720 Dichelobacter nodosus SBML MML
dol00720 Candidatus Desulfococcus oleovorans SBML MML
dola00720 Oryzias latipes (Japanese medaka) SBML MML
dota00720 Ostreococcus tauri SBML MML
dpkn00720 (Undocumented) SBML MML
dpo00720 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00720 (Undocumented) SBML MML
dps00720 Desulfotalea psychrophila SBML MML
dptm00720 (Undocumented) SBML MML
dra00720 Deinococcus radiodurans SBML MML
dre00720 Danio rerio (zebrafish) SBML MML
drm00720 Desulfotomaculum reducens SBML MML
dsba00720 Saccharomyces bayanus SBML MML
dsh00720 Dinoroseobacter shibae SBML MML
dsmi00720 Saccharomyces mikatae SBML MML
dspd00720 (Undocumented) SBML MML
dsy00720 Desulfitobacterium hafniense Y51 SBML MML
dtni00720 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00720 (Undocumented) SBML MML
dvl00720 Desulfovibrio vulgaris DP4 SBML MML
dvu00720 Desulfovibrio vulgaris Hildenborough SBML MML
dvvi00720 (Undocumented) SBML MML
eacp00720 (Undocumented) SBML MML
eath00720 Arabidopsis thaliana (thale cress) (EST) SBML MML
eba00720 Aromatoleum aromaticum EbN1 SBML MML
ebna00720 Brassica napus (rape) (EST) SBML MML
ebvl00720 Beta vulgaris (beet) (EST) SBML MML
eca00720 Erwinia carotovora SBML MML
ecan00720 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00720 Escherichia coli CFT073 (UPEC) SBML MML
ecd00720 Escherichia coli K-12 DH10B SBML MML
ece00720 Escherichia coli O157 EDL933 (EHEC) SBML MML
ech00720 Ehrlichia chaffeensis SBML MML
eci00720 Escherichia coli UTI89 (UPEC) SBML MML
ecj00720 Escherichia coli K-12 W3110 SBML MML
ecl00720 Escherichia coli ATCC 8739 SBML MML
ecm00720 Escherichia coli SECEC SBML MML
ecn00720 Ehrlichia canis SBML MML
eco00720 Escherichia coli K-12 MG1655 SBML MML
ecp00720 Escherichia coli 536 (UPEC) SBML MML
ecs00720 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00720 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00720 Ciona savignyi (EST) SBML MML
ecv00720 Escherichia coli APEC O1 SBML MML
ecw00720 Escherichia coli E24377A SBML MML
ecx00720 Escherichia coli HS SBML MML
eees00720 Euphorbia esula (leafy spurge) (EST) SBML MML
efar00720 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00720 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00720 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00720 Glycine max (soybean) (EST) SBML MML
egra00720 Gossypium raimondii (EST) SBML MML
ehan00720 Helianthus annuus (sunflower) (EST) SBML MML
ehvu00720 Hordeum vulgare (barley) (EST) SBML MML
eini00720 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00720 Erythrobacter litoralis SBML MML
elja00720 Lotus japonicus (lotus) (EST) SBML MML
elpe00720 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00720 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00720 Lactuca sativa (lettuce) (EST) SBML MML
elvi00720 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00720 Manihot esculenta (cassava) (EST) SBML MML
emte00720 Molgula tectiformis (EST) SBML MML
emtr00720 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00720 Nicotiana benthamiana (EST) SBML MML
ent00720 Enterobacter sp. 638 SBML MML
enta00720 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00720 Oryza sativa (rice) (EST) SBML MML
eosi00720 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00720 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00720 Picea glauca (white spruce) (EST) SBML MML
epop00720 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00720 (Undocumented) SBML MML
eppi00720 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00720 Physcomitrella patens subsp. patens (EST) SBML MML
epps00720 Prunus persica (peach) (EST) SBML MML
epsi00720 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00720 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00720 Populus tremula (European aspen) (EST) SBML MML
erg00720 Ehrlichia ruminantium Gardel SBML MML
eru00720 Ehrlichia ruminantium Welgevonden (South Africa) SBML MML
erw00720 Ehrlichia ruminantium Welgevonden (France) SBML MML
esa00720 Enterobacter sakazakii SBML MML
esbi00720 Sorghum bicolor (sorghum) (EST) SBML MML
esi00720 Exiguobacterium sibiricum SBML MML
esja00720 Schistosoma japonicum (fluke) (EST) SBML MML
esly00720 Solanum lycopersicum (tomato) (EST) SBML MML
esof00720 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00720 (Undocumented) SBML MML
espu00720 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00720 Solanum tuberosum (potato) (EST) SBML MML
eta00720 Erwinia tasmaniensis SBML MML
etae00720 Triticum aestivum (wheat) (EST) SBML MML
evvi00720 Vitis vinifera (wine grape) (EST) SBML MML
ezel00720 (Undocumented) SBML MML
ezma00720 Zea mays (maize) (EST) SBML MML
fal00720 Frankia alni SBML MML
fgr00720 Fusarium graminearum SBML MML
fjo00720 Flavobacterium johnsoniae SBML MML
fma00720 Finegoldia magna SBML MML
fno00720 Fervidobacterium nodosum SBML MML
fph00720 Francisella philomiragia SBML MML
fps00720 Flavobacterium psychrophilum SBML MML
fra00720 Frankia sp. CcI3 SBML MML
fre00720 Frankia sp. EAN1pec SBML MML
fta00720 Francisella tularensis subsp. holarctica FTNF002-00 SBML MML
ftf00720 Francisella tularensis subsp. tularensis FSC 198 SBML MML
fth00720 Francisella tularensis subsp. holarctica OSU18 SBML MML
ftl00720 Francisella tularensis subsp. holarctica LVS SBML MML
ftm00720 Francisella tularensis subsp. mediasiatica FSC147 SBML MML
ftn00720 Francisella tularensis subsp. novicida U112 SBML MML
ftu00720 Francisella tularensis subsp. tularensis SCHU S4 SBML MML
ftw00720 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gbe00720 Granulobacter bethesdensis SBML MML
gdi00720 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00720 Gramella forsetii SBML MML
gga00720 Gallus gallus (chicken) SBML MML
gka00720 Geobacillus kaustophilus SBML MML
glo00720 Geobacter lovleyi SBML MML
gme00720 Geobacter metallireducens SBML MML
gox00720 Gluconobacter oxydans SBML MML
gsu00720 Geobacter sulfurreducens SBML MML
gtn00720 Geobacillus thermodenitrificans SBML MML
gur00720 Geobacter uraniumreducens SBML MML
gvi00720 Gloeobacter violaceus SBML MML
hac00720 Helicobacter acinonychis SBML MML
hal00720 Halobacterium sp. NRC-1 SBML MML
har00720 Herminiimonas arsenicoxydans SBML MML
hau00720 Herpetosiphon aurantiacus SBML MML
hbu00720 Hyperthermus butylicus SBML MML
hch00720 Hahella chejuensis SBML MML
hdu00720 Haemophilus ducreyi SBML MML
hha00720 Halorhodospira halophila SBML MML
hhe00720 Helicobacter hepaticus SBML MML
hin00720 Haemophilus influenzae Rd KW20 (serotype d) SBML MML
hip00720 Haemophilus influenzae PittEE SBML MML
hiq00720 Haemophilus influenzae PittGG SBML MML
hit00720 Haemophilus influenzae 86-028NP (nontypeable) SBML MML
hma00720 Haloarcula marismortui SBML MML
hmo00720 Heliobacterium modesticaldum SBML MML
hne00720 Hyphomonas neptunium SBML MML
hpa00720 Helicobacter pylori HPAG1 SBML MML
hpj00720 Helicobacter pylori J99 SBML MML
hpy00720 Helicobacter pylori 26695 SBML MML
hsa00720 Homo sapiens (human) SBML MML
hsl00720 Halobacterium salinarum R1 SBML MML
hsm00720 Haemophilus somnus 2336 SBML MML
hso00720 Haemophilus somnus 129PT SBML MML
hwa00720 Haloquadratum walsbyi SBML MML
iho00720 Ignicoccus hospitalis SBML MML
ilo00720 Idiomarina loihiensis SBML MML
jan00720 Jannaschia sp. CCS1 SBML MML
kcr00720 Candidatus Korarchaeum cryptofilum SBML MML
kla00720 Kluyveromyces lactis SBML MML
kpn00720 Klebsiella pneumoniae SBML MML
kra00720 Kineococcus radiotolerans SBML MML
krh00720 Kocuria rhizophila SBML MML
lac00720 Lactobacillus acidophilus SBML MML
lbc00720 Laccaria bicolor SBML MML
lbf00720 Leptospira biflexa serovar Patoc Patoc 1 (Ames) SBML MML
lbi00720 Leptospira biflexa serovar Patoc Patoc 1 (Paris) SBML MML
lbj00720 Leptospira borgpetersenii JB197 SBML MML
lbl00720 Leptospira borgpetersenii L550 SBML MML
lbr00720 Lactobacillus brevis SBML MML
lbu00720 Lactobacillus delbrueckii ATCC BAA-365 SBML MML
lca00720 Lactobacillus casei ATCC 334 SBML MML
lch00720 Leptothrix cholodnii SBML MML
lci00720 Leuconostoc citreum SBML MML
ldb00720 Lactobacillus delbrueckii ATCC 11842 SBML MML
lga00720 Lactobacillus gasseri SBML MML
lhe00720 Lactobacillus helveticus SBML MML
lic00720 Leptospira interrogans serovar Copenhageni SBML MML
lil00720 Leptospira interrogans serovar lai SBML MML
lin00720 Listeria innocua SBML MML
lip00720 Lawsonia intracellularis SBML MML
ljo00720 Lactobacillus johnsonii SBML MML
lla00720 Lactococcus lactis subsp. lactis IL1403 SBML MML
llc00720 Lactococcus lactis subsp. cremoris SK11 SBML MML
llm00720 Lactococcus lactis subsp. cremoris MG1363 SBML MML
lma00720 Leishmania major SBML MML
lmf00720 Listeria monocytogenes F2365 SBML MML
lmo00720 Listeria monocytogenes EGD-e SBML MML
lpc00720 Legionella pneumophila Corby SBML MML
lpf00720 Legionella pneumophila Lens SBML MML
lpl00720 Lactobacillus plantarum WCFS1 SBML MML
lpn00720 Legionella pneumophila Philadelphia 1 SBML MML
lpp00720 Legionella pneumophila Paris SBML MML
lre00720 Lactobacillus reuteri DSM 20016 SBML MML
lsl00720 Lactobacillus salivarius SBML MML
lsp00720 Lysinibacillus sphaericus SBML MML
lwe00720 Listeria welshimeri SLCC5334 SBML MML
lxx00720 Leifsonia xyli xyli CTCB07 SBML MML
mab00720 Mycobacterium abscessus ATCC 19977T SBML MML
mac00720 Methanosarcina acetivorans SBML MML
mae00720 Methanococcus aeolicus SBML MML
mag00720 Magnetospirillum magneticum SBML MML
maq00720 Marinobacter aquaeolei SBML MML
mar00720 Microcystis aeruginosa SBML MML
mav00720 Mycobacterium avium 104 SBML MML
mba00720 Methanosarcina barkeri SBML MML
mbb00720 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbn00720 Candidatus Methanoregula boonei SBML MML
mbo00720 Mycobacterium bovis AF2122/97 SBML MML
mbr00720 Monosiga brevicollis SBML MML
mbu00720 Methanococcoides burtonii SBML MML
mca00720 Methylococcus capsulatus SBML MML
mcc00720 Macaca mulatta (rhesus monkey) SBML MML
mdo00720 Monodelphis domestica (opossum) SBML MML
mem00720 Methanoculleus marisnigri SBML MML
mes00720 Mesorhizobium sp. BNC1 SBML MML
met00720 Methylobacterium sp. 4-46 SBML MML
mex00720 Methylobacterium extorquens SBML MML
mfa00720 Methylobacillus flagellatus SBML MML
mgi00720 Mycobacterium gilvum SBML MML
mgl00720 Malassezia globosa SBML MML
mgm00720 Magnetococcus sp. MC-1 SBML MML
mgr00720 Magnaporthe grisea SBML MML
mhu00720 Methanospirillum hungatei SBML MML
mja00720 Methanococcus jannaschii SBML MML
mjl00720 Mycobacterium sp. JLS SBML MML
mka00720 Methanopyrus kandleri SBML MML
mkm00720 Mycobacterium sp. KMS SBML MML
mla00720 Methanocorpusculum labreanum SBML MML
mle00720 Mycobacterium leprae TN SBML MML
mlo00720 Mesorhizobium loti SBML MML
mma00720 Methanosarcina mazei SBML MML
mmc00720 Mycobacterium sp. MCS SBML MML
mmi00720 Mycobacterium marinum M SBML MML
mmp00720 Methanococcus maripaludis S2 SBML MML
mmq00720 Methanococcus maripaludis C5 SBML MML
mmr00720 Maricaulis maris SBML MML
mms00720 Minibacterium massiliensis SBML MML
mmu00720 Mus musculus (mouse) SBML MML
mmw00720 Marinomonas sp. MWYL1 SBML MML
mmx00720 Methanococcus maripaludis C6 SBML MML
mmz00720 Methanococcus maripaludis C7 SBML MML
mpa00720 Mycobacterium avium paratuberculosis SBML MML
mpt00720 Methylibium petroleiphilum SBML MML
mra00720 Mycobacterium tuberculosis H37Ra SBML MML
mrd00720 Methylobacterium radiotolerans SBML MML
mse00720 Metallosphaera sedula SBML MML
msi00720 Methanobrevibacter smithii ATCC 35061 SBML MML
msm00720 Mycobacterium smegmatis SBML MML
mst00720 Methanosphaera stadtmanae SBML MML
msu00720 Mannheimia succiniciproducens SBML MML
mta00720 Moorella thermoacetica SBML MML
mtc00720 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00720 Mycobacterium tuberculosis F11 SBML MML
mth00720 Methanobacterium thermoautotrophicum SBML MML
mtp00720 Methanosaeta thermophila SBML MML
mtu00720 Mycobacterium tuberculosis H37Rv SBML MML
mul00720 Mycobacterium ulcerans SBML MML
mva00720 Mycobacterium vanbaalenii SBML MML
mvn00720 Methanococcus vannielii SBML MML
mxa00720 Myxococcus xanthus SBML MML
nar00720 Novosphingobium aromaticivorans SBML MML
nca00720 Nocardioides sp. JS614 SBML MML
ncr00720 Neurospora crassa SBML MML
net00720 Nitrosomonas eutropha SBML MML
neu00720 Nitrosomonas europaea SBML MML
nfa00720 Nocardia farcinica SBML MML
ngo00720 Neisseria gonorrhoeae SBML MML
nha00720 Nitrobacter hamburgensis SBML MML
nis00720 Nitratiruptor sp. SB155-2 SBML MML
nma00720 Neisseria meningitidis Z2491 (serogroup A) SBML MML
nmc00720 Neisseria meningitidis FAM18 (serogroup C) SBML MML
nme00720 Neisseria meningitidis MC58 (serogroup B) SBML MML
nmn00720 Neisseria meningitidis 053442 (serogroup C) SBML MML
nmr00720 Nitrosopumilus maritimus SBML MML
nmu00720 Nitrosospira multiformis SBML MML
noc00720 Nitrosococcus oceani SBML MML
nph00720 Natronomonas pharaonis SBML MML
npu00720 Nostoc punctiforme SBML MML
nse00720 Neorickettsia sennetsu SBML MML
nve00720 Nematostella vectensis (sea anemone) SBML MML
nwi00720 Nitrobacter winogradskyi SBML MML
oaa00720 Ornithorhynchus anatinus (platypus) SBML MML
oan00720 Ochrobactrum anthropi SBML MML
oih00720 Oceanobacillus iheyensis SBML MML
olu00720 Ostreococcus lucimarinus SBML MML
osa00720 Oryza sativa japonica (Japanese rice) SBML MML
ote00720 Opitutus terrae SBML MML
ots00720 Orientia tsutsugamushi Boryong SBML MML
ott00720 Orientia tsutsugamushi Ikeda SBML MML
pab00720 Pyrococcus abyssi SBML MML
pac00720 Propionibacterium acnes SBML MML
pae00720 Pseudomonas aeruginosa PAO1 SBML MML
pai00720 Pyrobaculum aerophilum SBML MML
pan00720 Podospora anserina SBML MML
pap00720 Pseudomonas aeruginosa PA7 SBML MML
par00720 Psychrobacter arcticum SBML MML
pas00720 Pyrobaculum arsenaticum SBML MML
pat00720 Pseudoalteromonas atlantica SBML MML
pau00720 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pca00720 Pelobacter carbinolicus SBML MML
pcl00720 Pyrobaculum calidifontis SBML MML
pcr00720 Psychrobacter cryohalolentis SBML MML
pcu00720 Candidatus Protochlamydia amoebophila SBML MML
pde00720 Paracoccus denitrificans SBML MML
pdi00720 Parabacteroides distasonis SBML MML
pen00720 Pseudomonas entomophila SBML MML
pfa00720 Plasmodium falciparum 3D7 SBML MML
pfl00720 Pseudomonas fluorescens Pf-5 SBML MML
pfo00720 Pseudomonas fluorescens Pf0-1 SBML MML
pfu00720 Pyrococcus furiosus SBML MML
pgi00720 Porphyromonas gingivalis W83 SBML MML
pgn00720 Porphyromonas gingivalis ATCC 33277 SBML MML
pha00720 Pseudoalteromonas haloplanktis SBML MML
pho00720 Pyrococcus horikoshii SBML MML
pic00720 Pichia stipitis SBML MML
pin00720 Psychromonas ingrahamii SBML MML
pis00720 Pyrobaculum islandicum SBML MML
pla00720 Parvibaculum lavamentivorans SBML MML
plt00720 Pelodictyon luteolum SBML MML
plu00720 Photorhabdus luminescens SBML MML
pma00720 Prochlorococcus marinus SS120 SBML MML
pmb00720 Prochlorococcus marinus AS9601 SBML MML
pmc00720 Prochlorococcus marinus MIT 9515 SBML MML
pme00720 Prochlorococcus marinus NATL1A SBML MML
pmf00720 Prochlorococcus marinus MIT 9303 SBML MML
pmg00720 Prochlorococcus marinus MIT 9301 SBML MML
pmh00720 Prochlorococcus marinus MIT 9215 SBML MML
pmi00720 Prochlorococcus marinus MIT9312 SBML MML
pmj00720 Prochlorococcus marinus MIT 9211 SBML MML
pmm00720 Prochlorococcus marinus MED4 SBML MML
pmn00720 Prochlorococcus marinus NATL2A SBML MML
pmo00720 Petrotoga mobilis SBML MML
pmt00720 Prochlorococcus marinus MIT9313 SBML MML
pmu00720 Pasteurella multocida SBML MML
pmy00720 Pseudomonas mendocina SBML MML
pna00720 Polaromonas naphthalenivorans SBML MML
pne00720 Polynucleobacter necessarius SBML MML
pnu00720 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00720 Polaromonas sp. JS666 SBML MML
ppd00720 Pelobacter propionicus SBML MML
ppf00720 Pseudomonas putida F1 SBML MML
ppg00720 Pseudomonas putida GB-1 SBML MML
ppp00720 Physcomitrella patens subsp. patens SBML MML
ppr00720 Photobacterium profundum SBML MML
ppu00720 Pseudomonas putida KT2440 SBML MML
ppw00720 Pseudomonas putida W619 SBML MML
prw00720 Psychrobacter sp. PRwf-1 SBML MML
psa00720 Pseudomonas stutzeri SBML MML
psb00720 Pseudomonas syringae pv. syringae B728a SBML MML
psp00720 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00720 Pseudomonas syringae pv. tomato DC3000 SBML MML
pth00720 Pelotomaculum thermopropionicum SBML MML
pto00720 Picrophilus torridus SBML MML
ptr00720 Pan troglodytes (chimpanzee) SBML MML
pub00720 Candidatus Pelagibacter ubique SBML MML
pvi00720 Prosthecochloris vibrioformis SBML MML
pyo00720 Plasmodium yoelii SBML MML
rak00720 Rickettsia akari SBML MML
rba00720 Rhodopirellula baltica SBML MML
rbe00720 Rickettsia bellii RML369-C SBML MML
rbo00720 Rickettsia bellii OSU 85-389 SBML MML
rca00720 Roseiflexus castenholzii DSM13941 SBML MML
rci00720 Uncultured methanogenic archaeon RC-I SBML MML
rcm00720 Rickettsia canadensis SBML MML
rco00720 Rickettsia conorii SBML MML
rde00720 Roseobacter denitrificans SBML MML
rec00720 Rhizobium etli CIAT 652 SBML MML
reh00720 Ralstonia eutropha H16 SBML MML
ret00720 Rhizobium etli CFN 42 SBML MML
reu00720 Ralstonia eutropha JMP134 SBML MML
rfe00720 Rickettsia felis SBML MML
rfr00720 Rhodoferax ferrireducens SBML MML
rha00720 Rhodococcus sp. RHA1 SBML MML
rle00720 Rhizobium leguminosarum SBML MML
rma00720 Candidatus Ruthia magnifica SBML MML
rme00720 Ralstonia metallidurans SBML MML
rms00720 Rickettsia massiliae SBML MML
rno00720 Rattus norvegicus (rat) SBML MML
rpa00720 Rhodopseudomonas palustris CGA009 SBML MML
rpb00720 Rhodopseudomonas palustris HaA2 SBML MML
rpc00720 Rhodopseudomonas palustris BisB18 SBML MML
rpd00720 Rhodopseudomonas palustris BisB5 SBML MML
rpe00720 Rhodopseudomonas palustris BisA53 SBML MML
rpr00720 Rickettsia prowazekii SBML MML
rpt00720 Rhodopseudomonas palustris TIE-1 SBML MML
rri00720 Rickettsia rickettsii Sheila Smith SBML MML
rrj00720 Rickettsia rickettsii Iowa SBML MML
rrs00720 Roseiflexus sp. RS-1 SBML MML
rru00720 Rhodospirillum rubrum SBML MML
rsa00720 Renibacterium salmoninarum SBML MML
rsh00720 Rhodobacter sphaeroides ATCC 17029 SBML MML
rso00720 Ralstonia solanacearum SBML MML
rsp00720 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00720 Rhodobacter sphaeroides ATCC 17025 SBML MML
rty00720 Rickettsia typhi SBML MML
rxy00720 Rubrobacter xylanophilus SBML MML
saa00720 Staphylococcus aureus USA300 SBML MML
sab00720 Staphylococcus aureus RF122 SBML MML
sac00720 Staphylococcus aureus COL SBML MML
sae00720 Staphylococcus aureus Newman SBML MML
sah00720 Staphylococcus aureus JH1 SBML MML
sai00720 Sulfolobus acidocaldarius SBML MML
saj00720 Staphylococcus aureus JH9 SBML MML
sal00720 Sphingopyxis alaskensis SBML MML
sam00720 Staphylococcus aureus MW2 SBML MML
sao00720 Staphylococcus aureus NCTC8325 SBML MML
saq00720 Salinispora arenicola SBML MML
sar00720 Staphylococcus aureus MRSA252 SBML MML
sas00720 Staphylococcus aureus MSSA476 SBML MML
sat00720 Syntrophus aciditrophicus SBML MML
sau00720 Staphylococcus aureus N315 SBML MML
sav00720 Staphylococcus aureus Mu50 SBML MML
saw00720 Staphylococcus aureus Mu3 SBML MML
sax00720 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00720 Shewanella amazonensis SBML MML
sbc00720 Shigella boydii CDC 3083-94 SBML MML
sbl00720 Shewanella baltica OS155 SBML MML
sbm00720 Shewanella baltica OS185 SBML MML
sbn00720 Shewanella baltica OS195 SBML MML
sbo00720 Shigella boydii Sb227 SBML MML
sce00720 Saccharomyces cerevisiae SBML MML
scl00720 Sorangium cellulosum SBML MML
sco00720 Streptomyces coelicolor SBML MML
sde00720 Saccharophagus degradans SBML MML
sdn00720 Shewanella denitrificans SBML MML
sdy00720 Shigella dysenteriae SBML MML
sec00720 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00720 Saccharopolyspora erythraea SBML MML
sep00720 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00720 Staphylococcus epidermidis RP62A SBML MML
ses00720 Salmonella enterica subsp. arizonae SBML MML
sfl00720 Shigella flexneri 301 (serotype 2a) SBML MML
sfr00720 Shewanella frigidimarina SBML MML
sfu00720 Syntrophobacter fumaroxidans SBML MML
sfv00720 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00720 Shigella flexneri 2457T (serotype 2a) SBML MML
sgl00720 Sodalis glossinidius SBML MML
sgo00720 Streptococcus gordonii SBML MML
sgr00720 Streptomyces griseus SBML MML
sha00720 Staphylococcus haemolyticus SBML MML
she00720 Shewanella sp. MR-4 SBML MML
shl00720 Shewanella halifaxensis SBML MML
shm00720 Shewanella sp. MR-7 SBML MML
shn00720 Shewanella sp. ANA-3 SBML MML
shw00720 Shewanella sp. W3-18-1 SBML MML
sil00720 Ruegeria pomeroyi SBML MML
sit00720 Silicibacter sp. TM1040 SBML MML
slo00720 Shewanella loihica SBML MML
sma00720 Streptomyces avermitilis SBML MML
smd00720 Sinorhizobium medicae SBML MML
sme00720 Sinorhizobium meliloti SBML MML
smg00720 Candidatus Sulcia muelleri GWSS SBML MML
sml00720 Stenotrophomonas maltophilia SBML MML
smr00720 Staphylothermus marinus SBML MML
smu00720 Streptococcus mutans SBML MML
son00720 Shewanella oneidensis SBML MML
spc00720 Shewanella putrefaciens SBML MML
spe00720 Serratia proteamaculans SBML MML
spl00720 Shewanella pealeana SBML MML
spo00720 Schizosaccharomyces pombe SBML MML
spq00720 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spr00720 Streptococcus pneumoniae R6 SBML MML
spt00720 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spu00720 Strongylocentrotus purpuratus (purple sea urchin) SBML MML
spw00720 Streptococcus pneumoniae CGSP14 (serotype 14) SBML MML
sru00720 Salinibacter ruber SBML MML
ssa00720 Streptococcus sanguinis SBML MML
ssc00720 Sus scrofa (pig) SBML MML
sse00720 Shewanella sediminis SBML MML
ssn00720 Shigella sonnei SBML MML
sso00720 Sulfolobus solfataricus SBML MML
ssp00720 Staphylococcus saprophyticus SBML MML
ssu00720 Streptococcus suis 05ZYH33 SBML MML
ssv00720 Streptococcus suis 98HAH33 SBML MML
stc00720 Streptococcus thermophilus CNRZ1066 SBML MML
ste00720 Streptococcus thermophilus LMD-9 SBML MML
sth00720 Symbiobacterium thermophilum SBML MML
stl00720 Streptococcus thermophilus LMG18311 SBML MML
stm00720 Salmonella typhimurium LT2 SBML MML
sto00720 Sulfolobus tokodaii SBML MML
stp00720 Salinispora tropica SBML MML
stt00720 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00720 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sul00720 Sulfurihydrogenibium sp. YO3AOP1 SBML MML
sun00720 Sulfurovum sp. NBC37-1 SBML MML
sus00720 Solibacter usitatus SBML MML
swd00720 Shewanella woodyi ATCC 51908 SBML MML
swi00720 Sphingomonas wittichii SBML MML
swo00720 Syntrophomonas wolfei SBML MML
syc00720 Synechococcus elongatus PCC6301 SBML MML
syd00720 Synechococcus sp. CC9605 SBML MML
sye00720 Synechococcus sp. CC9902 SBML MML
syf00720 Synechococcus elongatus PCC7942 SBML MML
syg00720 Synechococcus sp. CC9311 SBML MML
syn00720 Synechocystis sp. PCC6803 SBML MML
syp00720 Synechococcus sp. PCC7002 SBML MML
syr00720 Synechococcus sp. RCC307 SBML MML
syw00720 Synechococcus sp. WH8102 SBML MML
syx00720 Synechococcus sp. WH7803 SBML MML
tac00720 Thermoplasma acidophilum SBML MML
tan00720 Theileria annulata SBML MML
tbd00720 Thiobacillus denitrificans SBML MML
tbr00720 Trypanosoma brucei SBML MML
tca00720 Tribolium castaneum (red flour beetle) SBML MML
tcr00720 Trypanosoma cruzi SBML MML
tcx00720 Thiomicrospira crunogena SBML MML
tde00720 Treponema denticola SBML MML
tdn00720 Thiomicrospira denitrificans SBML MML
tel00720 Thermosynechococcus elongatus SBML MML
ter00720 Trichodesmium erythraeum SBML MML
tet00720 Tetrahymena thermophila SBML MML
tex00720 Thermoanaerobacter sp. X514 SBML MML
tfu00720 Thermobifida fusca SBML MML
tko00720 Thermococcus kodakaraensis SBML MML
tle00720 Thermotoga lettingae SBML MML
tma00720 Thermotoga maritima SBML MML
tme00720 Thermosipho melanesiensis SBML MML
tne00720 Thermoproteus neutrophilus SBML MML
tpd00720 Thermoanaerobacter pseudethanolicus SBML MML
tpe00720 Thermofilum pendens SBML MML
tpt00720 Thermotoga petrophila SBML MML
tpv00720 Theileria parva SBML MML
trq00720 Thermotoga sp. RQ2 SBML MML
tte00720 Thermoanaerobacter tengcongensis SBML MML
tth00720 Thermus thermophilus HB27 SBML MML
ttj00720 Thermus thermophilus HB8 SBML MML
tva00720 Trichomonas vaginalis SBML MML
tvo00720 Thermoplasma volcanium SBML MML
uma00720 Ustilago maydis SBML MML
vch00720 Vibrio cholerae O1 SBML MML
vco00720 Vibrio cholerae O395 SBML MML
vei00720 Verminephrobacter eiseniae SBML MML
vfi00720 Vibrio fischeri SBML MML
vha00720 Vibrio harveyi SBML MML
vok00720 Candidatus Vesicomyosocius okutanii SBML MML
vpa00720 Vibrio parahaemolyticus SBML MML
vpo00720 Vanderwaltozyma polyspora SBML MML
vvu00720 Vibrio vulnificus CMCP6 SBML MML
vvy00720 Vibrio vulnificus YJ016 SBML MML
wbm00720 Wolbachia wBm SBML MML
wbr00720 Wigglesworthia glossinidia SBML MML
wol00720 Wolbachia wMel SBML MML
wpi00720 Wolbachia pipientis SBML MML
wsu00720 Wolinella succinogenes SBML MML
xac00720 Xanthomonas axonopodis SBML MML
xau00720 Xanthobacter autotrophicus SBML MML
xcb00720 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00720 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00720 Xanthomonas campestris pv. vesicatoria SBML MML
xfa00720 Xylella fastidiosa 9a5c SBML MML
xfm00720 Xylella fastidiosa M12 SBML MML
xfn00720 Xylella fastidiosa M23 SBML MML
xft00720 Xylella fastidiosa Temecula1 SBML MML
xla00720 Xenopus laevis (African clawed frog) SBML MML
xom00720 Xanthomonas oryzae MAFF311018 SBML MML
xoo00720 Xanthomonas oryzae KACC10331 SBML MML
xtr00720 Xenopus tropicalis (western clawed frog) SBML MML
yen00720 Yersinia enterocolitica SBML MML
yli00720 Yarrowia lipolytica SBML MML
ypa00720 Yersinia pestis Antiqua SBML MML
ype00720 Yersinia pestis CO92 SBML MML
ypg00720 Yersinia pestis Angola SBML MML
ypi00720 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00720 Yersinia pestis KIM SBML MML
ypm00720 Yersinia pestis Mediaevails SBML MML
ypn00720 Yersinia pestis Nepal516 SBML MML
ypp00720 Yersinia pestis Pestoides SBML MML
yps00720 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00720 Yersinia pseudotuberculosis YPIII SBML MML
zmo00720 Zymomonas mobilis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.