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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00780: Biotin metabolism

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aae00780 Aquifex aeolicus SBML MML
aau00780 Arthrobacter aurescens SBML MML
aav00780 Acidovorax avenae SBML MML
aba00780 Acidobacteria bacterium SBML MML
abc00780 Acinetobacter baumannii ACICU SBML MML
abm00780 Acinetobacter baumannii SDF SBML MML
abo00780 Alcanivorax borkumensis SBML MML
abu00780 Arcobacter butzleri SBML MML
aby00780 Acinetobacter baumannii AYE SBML MML
acb00780 Acinetobacter baumannii ATCC 17978 SBML MML
ace00780 Acidothermus cellulolyticus SBML MML
aci00780 Acinetobacter sp. ADP1 SBML MML
acl00780 Acholeplasma laidlawii SBML MML
acr00780 Acidiphilium cryptum JF-5 SBML MML
ade00780 Anaeromyxobacter dehalogenans 2CP-C SBML MML
aeh00780 Alkalilimnicola ehrlichei SBML MML
afm00780 Aspergillus fumigatus SBML MML
afu00780 Archaeoglobus fulgidus SBML MML
afw00780 Anaeromyxobacter sp. Fw109-5 SBML MML
aga00780 Anopheles gambiae (mosquito) SBML MML
ago00780 Ashbya gossypii (Eremothecium gossypii) SBML MML
aha00780 Aeromonas hydrophila SBML MML
ajs00780 Acidovorax sp. JS42 SBML MML
ama00780 Anaplasma marginale St. Maries SBML MML
amr00780 Acaryochloris marina SBML MML
amt00780 Alkaliphilus metalliredigens SBML MML
ana00780 Anabaena sp. PCC7120 SBML MML
ang00780 Aspergillus niger SBML MML
ani00780 Aspergillus nidulans SBML MML
aoe00780 Alkaliphilus oremlandii SBML MML
aor00780 Aspergillus oryzae SBML MML
apa00780 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
aph00780 Anaplasma phagocytophilum SBML MML
apj00780 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
apl00780 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
asa00780 Aeromonas salmonicida SBML MML
asu00780 Actinobacillus succinogenes SBML MML
atc00780 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00780 Arabidopsis thaliana (thale cress) SBML MML
atu00780 Agrobacterium tumefaciens C58 SBML MML
ava00780 Anabaena variabilis SBML MML
azc00780 Azorhizobium caulinodans SBML MML
azo00780 Azoarcus sp. BH72 SBML MML
baa00780 Bacillus anthracis A2012 SBML MML
bab00780 Buchnera aphidicola Bp SBML MML
bac00780 Burkholderia ambifaria MC40-6 SBML MML
bad00780 Bifidobacterium adolescentis SBML MML
bam00780 Burkholderia cepacia SBML MML
ban00780 Bacillus anthracis Ames SBML MML
bar00780 Bacillus anthracis Ames 0581 SBML MML
bas00780 Buchnera aphidicola Sg SBML MML
bat00780 Bacillus anthracis Sterne SBML MML
bav00780 Bordetella avium SBML MML
bay00780 Bacillus amyloliquefaciens SBML MML
bba00780 Bdellovibrio bacteriovorus SBML MML
bbk00780 Bartonella bacilliformis SBML MML
bbr00780 Bordetella bronchiseptica SBML MML
bbt00780 Bradyrhizobium sp. BTAi1 SBML MML
bca00780 Bacillus cereus ATCC 10987 SBML MML
bce00780 Bacillus cereus ATCC 14579 SBML MML
bch00780 Burkholderia cenocepacia HI2424 SBML MML
bci00780 Baumannia cicadellinicola SBML MML
bcl00780 Bacillus clausii SBML MML
bcm00780 Burkholderia cenocepacia MC0-3 SBML MML
bcn00780 Burkholderia cenocepacia AU1054 SBML MML
bcs00780 Brucella canis SBML MML
bcy00780 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00780 Bacillus cereus ZK SBML MML
bfl00780 Candidatus Blochmannia floridanus SBML MML
bfr00780 Bacteroides fragilis YCH46 SBML MML
bfs00780 Bacteroides fragilis NCTC9343 SBML MML
bha00780 Bacillus halodurans SBML MML
bhe00780 Bartonella henselae SBML MML
bid00780 Beijerinckia indica SBML MML
bja00780 Bradyrhizobium japonicum SBML MML
bld00780 Bacillus licheniformis DSM13 SBML MML
bli00780 Bacillus licheniformis ATCC 14580 SBML MML
blj00780 Bifidobacterium longum DJO10A SBML MML
blo00780 Bifidobacterium longum NCC2705 SBML MML
bma00780 Burkholderia mallei ATCC 23344 SBML MML
bmb00780 Brucella abortus 9-941 SBML MML
bmc00780 Brucella abortus S19 SBML MML
bme00780 Brucella melitensis 16M SBML MML
bmf00780 Brucella melitensis biovar Abortus SBML MML
bml00780 Burkholderia mallei NCTC 10229 SBML MML
bmn00780 Burkholderia mallei NCTC 10247 SBML MML
bms00780 Brucella suis 1330 SBML MML
bmt00780 Brucella suis ATCC 23445 SBML MML
bmu00780 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00780 Burkholderia mallei SAVP1 SBML MML
bmy00780 Brugia malayi (filaria) SBML MML
bov00780 Brucella ovis SBML MML
bpa00780 Bordetella parapertussis SBML MML
bpd00780 Burkholderia pseudomallei 668 SBML MML
bpe00780 Bordetella pertussis SBML MML
bph00780 Burkholderia phymatum SBML MML
bpl00780 Burkholderia pseudomallei 1106a SBML MML
bpm00780 Burkholderia pseudomallei 1710b SBML MML
bpn00780 Candidatus Blochmannia pennsylvanicus SBML MML
bps00780 Burkholderia pseudomallei K96243 SBML MML
bpt00780 Bordetella petrii SBML MML
bpu00780 Bacillus pumilus SBML MML
bqu00780 Bartonella quintana SBML MML
bra00780 Bradyrhizobium sp. ORS278 SBML MML
bsu00780 Bacillus subtilis SBML MML
bta00780 Bos taurus (cow) SBML MML
bte00780 Burkholderia thailandensis SBML MML
bth00780 Bacteroides thetaiotaomicron SBML MML
btk00780 Bacillus thuringiensis 97-27 SBML MML
btl00780 Bacillus thuringiensis Al Hakam SBML MML
btr00780 Bartonella tribocorum SBML MML
buc00780 Buchnera aphidicola APS SBML MML
bur00780 Burkholderia sp. 383 SBML MML
bvi00780 Burkholderia vietnamiensis SBML MML
bvu00780 Bacteroides vulgatus SBML MML
bwe00780 Bacillus weihenstephanensis SBML MML
bxe00780 Burkholderia xenovorans SBML MML
cab00780 Chlamydophila abortus SBML MML
cac00780 Clostridium acetobutylicum SBML MML
cak00780 Caulobacter sp. K31 SBML MML
cal00780 Candida albicans SBML MML
cau00780 Chloroflexus aurantiacus SBML MML
cba00780 Clostridium botulinum A ATCC 19397 SBML MML
cbb00780 Clostridium botulinum B1 Okra SBML MML
cbd00780 Coxiella burnetii Dugway 5J108-111 SBML MML
cbe00780 Clostridium beijerinckii SBML MML
cbf00780 Clostridium botulinum F Langeland SBML MML
cbh00780 Clostridium botulinum A Hall SBML MML
cbk00780 Clostridium botulinum B Eklund 17B SBML MML
cbl00780 Clostridium botulinum A3 Loch Maree SBML MML
cbo00780 Clostridium botulinum A ATCC 3502 SBML MML
cbs00780 Coxiella burnetii RSA 331 SBML MML
cbu00780 Coxiella burnetii RSA 493 SBML MML
cca00780 Chlamydophila caviae SBML MML
cch00780 Chlorobium chlorochromatii SBML MML
cco00780 Campylobacter concisus 13826 SBML MML
ccr00780 Caulobacter crescentus CB15 SBML MML
ccv00780 Campylobacter curvus SBML MML
cdf00780 Clostridium difficile SBML MML
cdi00780 Corynebacterium diphtheriae SBML MML
cef00780 Corynebacterium efficiens SBML MML
cfa00780 Canis familiaris (dog) SBML MML
cfe00780 Chlamydophila felis SBML MML
cff00780 Campylobacter fetus SBML MML
cgb00780 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00780 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgt00780 Corynebacterium glutamicum R SBML MML
cha00780 Campylobacter hominis ATCC BAA-381 SBML MML
chu00780 Cytophaga hutchinsonii SBML MML
chy00780 Carboxydothermus hydrogenoformans SBML MML
cja00780 Cellvibrio japonicus SBML MML
cjd00780 Campylobacter jejuni subsp. doylei 269.97 SBML MML
cje00780 Campylobacter jejuni NCTC11168 SBML MML
cjj00780 Campylobacter jejuni 81-176 SBML MML
cjk00780 Corynebacterium jeikeium SBML MML
cjr00780 Campylobacter jejuni RM1221 SBML MML
cju00780 Campylobacter jejuni 81116 SBML MML
ckl00780 Clostridium kluyveri DSM 555 SBML MML
cko00780 Citrobacter koseri ATCC BAA-895 SBML MML
cme00780 Cyanidioschyzon merolae SBML MML
cmi00780 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00780 Clavibacter michiganensis subsp. sepedonicus SBML MML
cmu00780 Chlamydia muridarum SBML MML
cnb00780 Cryptococcus neoformans B-3501A SBML MML
cne00780 Cryptococcus neoformans JEC21 SBML MML
cno00780 Clostridium novyi SBML MML
cpa00780 Chlamydophila pneumoniae AR39 SBML MML
cpb00780 Chlorobium phaeobacteroides BS1 SBML MML
cpe00780 Clostridium perfringens 13 SBML MML
cpf00780 Clostridium perfringens ATCC 13124 SBML MML
cph00780 Chlorobium phaeobacteroides DSM 266 SBML MML
cpj00780 Chlamydophila pneumoniae J138 SBML MML
cpn00780 Chlamydophila pneumoniae CWL029 SBML MML
cpr00780 Clostridium perfringens SM101 SBML MML
cps00780 Colwellia psychrerythraea SBML MML
cpt00780 Chlamydophila pneumoniae TW183 SBML MML
cpy00780 Clostridium phytofermentans SBML MML
cre00780 Chlamydomonas reinhardtii SBML MML
csa00780 Chromohalobacter salexigens SBML MML
csc00780 Caldicellulosiruptor saccharolyticus SBML MML
cta00780 Chlamydia trachomatis A/HAR-13 (serovar A) SBML MML
ctb00780 Chlamydia trachomatis 434/Bu SBML MML
ctc00780 Clostridium tetani E88 SBML MML
cte00780 Chlorobaculum tepidum SBML MML
cth00780 Clostridium thermocellum SBML MML
cti00780 Cupriavidus taiwanensis SBML MML
ctl00780 Chlamydia trachomatis L2b/UCH-1/proctitis SBML MML
ctr00780 Chlamydia trachomatis D/UW-3/CX (serovar D) SBML MML
cur00780 Corynebacterium urealyticum SBML MML
cvi00780 Chromobacterium violaceum SBML MML
cya00780 Cyanobacteria Yellowstone A-Prime SBML MML
cyb00780 Cyanobacteria Yellowstone B-Prime SBML MML
cyt00780 Cyanothece sp. ATCC 51142 SBML MML
daag00780 (Undocumented) SBML MML
dac00780 Delftia acidovorans SBML MML
dame00780 (Undocumented) SBML MML
dar00780 Dechloromonas aromatica SBML MML
dau00780 Candidatus Desulforudis audaxviator SBML MML
dbmo00780 Bombyx mori (silkmoth) SBML MML
dcbr00780 (Undocumented) SBML MML
dcin00780 (Undocumented) SBML MML
dde00780 Desulfovibrio desulfuricans G20 SBML MML
ddi00780 Dictyostelium discoideum SBML MML
deb00780 Dehalococcoides sp. BAV1 SBML MML
decb00780 (Undocumented) SBML MML
deh00780 Dehalococcoides sp. CBDB1 SBML MML
det00780 Dehalococcoides ethenogenes SBML MML
dfru00780 Fugu rubripes (Japanese puffer fish) SBML MML
dge00780 Deinococcus geothermalis SBML MML
dha00780 Debaryomyces hansenii SBML MML
dkwa00780 Kluyveromyces waltii SBML MML
dme00780 Drosophila melanogaster (fruit fly) SBML MML
dol00780 Candidatus Desulfococcus oleovorans SBML MML
dola00780 Oryzias latipes (Japanese medaka) SBML MML
dota00780 Ostreococcus tauri SBML MML
dpo00780 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00780 (Undocumented) SBML MML
dps00780 Desulfotalea psychrophila SBML MML
dptm00780 (Undocumented) SBML MML
dra00780 Deinococcus radiodurans SBML MML
drm00780 Desulfotomaculum reducens SBML MML
dsba00780 Saccharomyces bayanus SBML MML
dsh00780 Dinoroseobacter shibae SBML MML
dsmi00780 Saccharomyces mikatae SBML MML
dspd00780 (Undocumented) SBML MML
dsy00780 Desulfitobacterium hafniense Y51 SBML MML
dtni00780 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00780 (Undocumented) SBML MML
dvl00780 Desulfovibrio vulgaris DP4 SBML MML
dvu00780 Desulfovibrio vulgaris Hildenborough SBML MML
dvvi00780 (Undocumented) SBML MML
eacp00780 (Undocumented) SBML MML
eath00780 Arabidopsis thaliana (thale cress) (EST) SBML MML
eba00780 Aromatoleum aromaticum EbN1 SBML MML
ebna00780 Brassica napus (rape) (EST) SBML MML
ebvl00780 Beta vulgaris (beet) (EST) SBML MML
eca00780 Erwinia carotovora SBML MML
ecan00780 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00780 Escherichia coli CFT073 (UPEC) SBML MML
ecd00780 Escherichia coli K-12 DH10B SBML MML
ece00780 Escherichia coli O157 EDL933 (EHEC) SBML MML
ech00780 Ehrlichia chaffeensis SBML MML
eci00780 Escherichia coli UTI89 (UPEC) SBML MML
ecj00780 Escherichia coli K-12 W3110 SBML MML
ecl00780 Escherichia coli ATCC 8739 SBML MML
ecm00780 Escherichia coli SECEC SBML MML
ecn00780 Ehrlichia canis SBML MML
eco00780 Escherichia coli K-12 MG1655 SBML MML
ecp00780 Escherichia coli 536 (UPEC) SBML MML
ecs00780 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00780 Citrus sinensis (Valencia orange) (EST) SBML MML
ecv00780 Escherichia coli APEC O1 SBML MML
ecw00780 Escherichia coli E24377A SBML MML
ecx00780 Escherichia coli HS SBML MML
eees00780 Euphorbia esula (leafy spurge) (EST) SBML MML
efa00780 Enterococcus faecalis SBML MML
efar00780 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00780 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00780 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00780 Glycine max (soybean) (EST) SBML MML
egra00780 Gossypium raimondii (EST) SBML MML
ehan00780 Helianthus annuus (sunflower) (EST) SBML MML
ehi00780 Entamoeba histolytica SBML MML
ehvu00780 Hordeum vulgare (barley) (EST) SBML MML
eini00780 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00780 Erythrobacter litoralis SBML MML
elja00780 Lotus japonicus (lotus) (EST) SBML MML
elpe00780 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00780 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00780 Lactuca sativa (lettuce) (EST) SBML MML
emec00780 Manihot esculenta (cassava) (EST) SBML MML
emtr00780 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00780 Nicotiana benthamiana (EST) SBML MML
ent00780 Enterobacter sp. 638 SBML MML
enta00780 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00780 Oryza sativa (rice) (EST) SBML MML
eosi00780 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00780 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00780 Picea glauca (white spruce) (EST) SBML MML
epop00780 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppi00780 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00780 Physcomitrella patens subsp. patens (EST) SBML MML
epps00780 Prunus persica (peach) (EST) SBML MML
epsi00780 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00780 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00780 Populus tremula (European aspen) (EST) SBML MML
erg00780 Ehrlichia ruminantium Gardel SBML MML
eru00780 Ehrlichia ruminantium Welgevonden (South Africa) SBML MML
erw00780 Ehrlichia ruminantium Welgevonden (France) SBML MML
esa00780 Enterobacter sakazakii SBML MML
esbi00780 Sorghum bicolor (sorghum) (EST) SBML MML
esi00780 Exiguobacterium sibiricum SBML MML
esja00780 Schistosoma japonicum (fluke) (EST) SBML MML
esly00780 Solanum lycopersicum (tomato) (EST) SBML MML
esof00780 Saccharum officinarum (sugarcane) (EST) SBML MML
espu00780 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00780 Solanum tuberosum (potato) (EST) SBML MML
eta00780 Erwinia tasmaniensis SBML MML
etae00780 Triticum aestivum (wheat) (EST) SBML MML
evvi00780 Vitis vinifera (wine grape) (EST) SBML MML
ezma00780 Zea mays (maize) (EST) SBML MML
fal00780 Frankia alni SBML MML
fgr00780 Fusarium graminearum SBML MML
fjo00780 Flavobacterium johnsoniae SBML MML
fma00780 Finegoldia magna SBML MML
fno00780 Fervidobacterium nodosum SBML MML
fnu00780 Fusobacterium nucleatum SBML MML
fph00780 Francisella philomiragia SBML MML
fps00780 Flavobacterium psychrophilum SBML MML
fra00780 Frankia sp. CcI3 SBML MML
fre00780 Frankia sp. EAN1pec SBML MML
fta00780 Francisella tularensis subsp. holarctica FTNF002-00 SBML MML
ftf00780 Francisella tularensis subsp. tularensis FSC 198 SBML MML
fth00780 Francisella tularensis subsp. holarctica OSU18 SBML MML
ftl00780 Francisella tularensis subsp. holarctica LVS SBML MML
ftm00780 Francisella tularensis subsp. mediasiatica FSC147 SBML MML
ftn00780 Francisella tularensis subsp. novicida U112 SBML MML
ftu00780 Francisella tularensis subsp. tularensis SCHU S4 SBML MML
ftw00780 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gbe00780 Granulobacter bethesdensis SBML MML
gdi00780 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00780 Gramella forsetii SBML MML
gga00780 Gallus gallus (chicken) SBML MML
gka00780 Geobacillus kaustophilus SBML MML
gla00780 Giardia lamblia SBML MML
glo00780 Geobacter lovleyi SBML MML
gme00780 Geobacter metallireducens SBML MML
gox00780 Gluconobacter oxydans SBML MML
gsu00780 Geobacter sulfurreducens SBML MML
gur00780 Geobacter uraniumreducens SBML MML
gvi00780 Gloeobacter violaceus SBML MML
hac00780 Helicobacter acinonychis SBML MML
hal00780 Halobacterium sp. NRC-1 SBML MML
har00780 Herminiimonas arsenicoxydans SBML MML
hau00780 Herpetosiphon aurantiacus SBML MML
hbu00780 Hyperthermus butylicus SBML MML
hch00780 Hahella chejuensis SBML MML
hdu00780 Haemophilus ducreyi SBML MML
hha00780 Halorhodospira halophila SBML MML
hhe00780 Helicobacter hepaticus SBML MML
hin00780 Haemophilus influenzae Rd KW20 (serotype d) SBML MML
hip00780 Haemophilus influenzae PittEE SBML MML
hiq00780 Haemophilus influenzae PittGG SBML MML
hit00780 Haemophilus influenzae 86-028NP (nontypeable) SBML MML
hma00780 Haloarcula marismortui SBML MML
hmo00780 Heliobacterium modesticaldum SBML MML
hne00780 Hyphomonas neptunium SBML MML
hpa00780 Helicobacter pylori HPAG1 SBML MML
hpj00780 Helicobacter pylori J99 SBML MML
hpy00780 Helicobacter pylori 26695 SBML MML
hsa00780 Homo sapiens (human) SBML MML
hsl00780 Halobacterium salinarum R1 SBML MML
hsm00780 Haemophilus somnus 2336 SBML MML
hso00780 Haemophilus somnus 129PT SBML MML
hwa00780 Haloquadratum walsbyi SBML MML
ilo00780 Idiomarina loihiensis SBML MML
jan00780 Jannaschia sp. CCS1 SBML MML
kcr00780 Candidatus Korarchaeum cryptofilum SBML MML
kla00780 Kluyveromyces lactis SBML MML
kpn00780 Klebsiella pneumoniae SBML MML
kra00780 Kineococcus radiotolerans SBML MML
krh00780 Kocuria rhizophila SBML MML
lbc00780 Laccaria bicolor SBML MML
lbf00780 Leptospira biflexa serovar Patoc Patoc 1 (Ames) SBML MML
lbi00780 Leptospira biflexa serovar Patoc Patoc 1 (Paris) SBML MML
lbj00780 Leptospira borgpetersenii JB197 SBML MML
lbl00780 Leptospira borgpetersenii L550 SBML MML
lbr00780 Lactobacillus brevis SBML MML
lca00780 Lactobacillus casei ATCC 334 SBML MML
lch00780 Leptothrix cholodnii SBML MML
ldb00780 Lactobacillus delbrueckii ATCC 11842 SBML MML
lic00780 Leptospira interrogans serovar Copenhageni SBML MML
lil00780 Leptospira interrogans serovar lai SBML MML
lin00780 Listeria innocua SBML MML
lip00780 Lawsonia intracellularis SBML MML
lla00780 Lactococcus lactis subsp. lactis IL1403 SBML MML
llc00780 Lactococcus lactis subsp. cremoris SK11 SBML MML
llm00780 Lactococcus lactis subsp. cremoris MG1363 SBML MML
lma00780 Leishmania major SBML MML
lme00780 Leuconostoc mesenteroides SBML MML
lmf00780 Listeria monocytogenes F2365 SBML MML
lmo00780 Listeria monocytogenes EGD-e SBML MML
lpc00780 Legionella pneumophila Corby SBML MML
lpf00780 Legionella pneumophila Lens SBML MML
lpl00780 Lactobacillus plantarum WCFS1 SBML MML
lpn00780 Legionella pneumophila Philadelphia 1 SBML MML
lpp00780 Legionella pneumophila Paris SBML MML
lsa00780 Lactobacillus sakei SBML MML
lsl00780 Lactobacillus salivarius SBML MML
lsp00780 Lysinibacillus sphaericus SBML MML
lwe00780 Listeria welshimeri SLCC5334 SBML MML
lxx00780 Leifsonia xyli xyli CTCB07 SBML MML
mab00780 Mycobacterium abscessus ATCC 19977T SBML MML
mac00780 Methanosarcina acetivorans SBML MML
mae00780 Methanococcus aeolicus SBML MML
mag00780 Magnetospirillum magneticum SBML MML
maq00780 Marinobacter aquaeolei SBML MML
mar00780 Microcystis aeruginosa SBML MML
mav00780 Mycobacterium avium 104 SBML MML
mba00780 Methanosarcina barkeri SBML MML
mbb00780 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbn00780 Candidatus Methanoregula boonei SBML MML
mbo00780 Mycobacterium bovis AF2122/97 SBML MML
mbu00780 Methanococcoides burtonii SBML MML
mca00780 Methylococcus capsulatus SBML MML
mcc00780 Macaca mulatta (rhesus monkey) SBML MML
mdo00780 Monodelphis domestica (opossum) SBML MML
mem00780 Methanoculleus marisnigri SBML MML
mes00780 Mesorhizobium sp. BNC1 SBML MML
met00780 Methylobacterium sp. 4-46 SBML MML
mex00780 Methylobacterium extorquens SBML MML
mfa00780 Methylobacillus flagellatus SBML MML
mgi00780 Mycobacterium gilvum SBML MML
mgl00780 Malassezia globosa SBML MML
mgm00780 Magnetococcus sp. MC-1 SBML MML
mgr00780 Magnaporthe grisea SBML MML
mhu00780 Methanospirillum hungatei SBML MML
mja00780 Methanococcus jannaschii SBML MML
mjl00780 Mycobacterium sp. JLS SBML MML
mkm00780 Mycobacterium sp. KMS SBML MML
mle00780 Mycobacterium leprae TN SBML MML
mlo00780 Mesorhizobium loti SBML MML
mma00780 Methanosarcina mazei SBML MML
mmc00780 Mycobacterium sp. MCS SBML MML
mmi00780 Mycobacterium marinum M SBML MML
mmp00780 Methanococcus maripaludis S2 SBML MML
mmq00780 Methanococcus maripaludis C5 SBML MML
mmr00780 Maricaulis maris SBML MML
mms00780 Minibacterium massiliensis SBML MML
mmu00780 Mus musculus (mouse) SBML MML
mmw00780 Marinomonas sp. MWYL1 SBML MML
mmx00780 Methanococcus maripaludis C6 SBML MML
mmz00780 Methanococcus maripaludis C7 SBML MML
mpa00780 Mycobacterium avium paratuberculosis SBML MML
mpt00780 Methylibium petroleiphilum SBML MML
mra00780 Mycobacterium tuberculosis H37Ra SBML MML
mrd00780 Methylobacterium radiotolerans SBML MML
mse00780 Metallosphaera sedula SBML MML
msi00780 Methanobrevibacter smithii ATCC 35061 SBML MML
msm00780 Mycobacterium smegmatis SBML MML
msu00780 Mannheimia succiniciproducens SBML MML
mta00780 Moorella thermoacetica SBML MML
mtc00780 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00780 Mycobacterium tuberculosis F11 SBML MML
mth00780 Methanobacterium thermoautotrophicum SBML MML
mtp00780 Methanosaeta thermophila SBML MML
mtu00780 Mycobacterium tuberculosis H37Rv SBML MML
mul00780 Mycobacterium ulcerans SBML MML
mva00780 Mycobacterium vanbaalenii SBML MML
mvn00780 Methanococcus vannielii SBML MML
mxa00780 Myxococcus xanthus SBML MML
nar00780 Novosphingobium aromaticivorans SBML MML
nca00780 Nocardioides sp. JS614 SBML MML
ncr00780 Neurospora crassa SBML MML
net00780 Nitrosomonas eutropha SBML MML
neu00780 Nitrosomonas europaea SBML MML
nfa00780 Nocardia farcinica SBML MML
ngo00780 Neisseria gonorrhoeae SBML MML
nha00780 Nitrobacter hamburgensis SBML MML
nis00780 Nitratiruptor sp. SB155-2 SBML MML
nma00780 Neisseria meningitidis Z2491 (serogroup A) SBML MML
nmc00780 Neisseria meningitidis FAM18 (serogroup C) SBML MML
nme00780 Neisseria meningitidis MC58 (serogroup B) SBML MML
nmn00780 Neisseria meningitidis 053442 (serogroup C) SBML MML
nmr00780 Nitrosopumilus maritimus SBML MML
nmu00780 Nitrosospira multiformis SBML MML
noc00780 Nitrosococcus oceani SBML MML
nph00780 Natronomonas pharaonis SBML MML
npu00780 Nostoc punctiforme SBML MML
nse00780 Neorickettsia sennetsu SBML MML
nve00780 Nematostella vectensis (sea anemone) SBML MML
nwi00780 Nitrobacter winogradskyi SBML MML
oaa00780 Ornithorhynchus anatinus (platypus) SBML MML
oan00780 Ochrobactrum anthropi SBML MML
oih00780 Oceanobacillus iheyensis SBML MML
olu00780 Ostreococcus lucimarinus SBML MML
ooe00780 Oenococcus oeni SBML MML
osa00780 Oryza sativa japonica (Japanese rice) SBML MML
ote00780 Opitutus terrae SBML MML
pab00780 Pyrococcus abyssi SBML MML
pac00780 Propionibacterium acnes SBML MML
pae00780 Pseudomonas aeruginosa PAO1 SBML MML
pan00780 Podospora anserina SBML MML
pap00780 Pseudomonas aeruginosa PA7 SBML MML
par00780 Psychrobacter arcticum SBML MML
pat00780 Pseudoalteromonas atlantica SBML MML
pau00780 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pca00780 Pelobacter carbinolicus SBML MML
pcr00780 Psychrobacter cryohalolentis SBML MML
pcu00780 Candidatus Protochlamydia amoebophila SBML MML
pde00780 Paracoccus denitrificans SBML MML
pdi00780 Parabacteroides distasonis SBML MML
pen00780 Pseudomonas entomophila SBML MML
pfl00780 Pseudomonas fluorescens Pf-5 SBML MML
pfo00780 Pseudomonas fluorescens Pf0-1 SBML MML
pfu00780 Pyrococcus furiosus SBML MML
pgi00780 Porphyromonas gingivalis W83 SBML MML
pgn00780 Porphyromonas gingivalis ATCC 33277 SBML MML
pha00780 Pseudoalteromonas haloplanktis SBML MML
pho00780 Pyrococcus horikoshii SBML MML
pic00780 Pichia stipitis SBML MML
pin00780 Psychromonas ingrahamii SBML MML
pla00780 Parvibaculum lavamentivorans SBML MML
plt00780 Pelodictyon luteolum SBML MML
plu00780 Photorhabdus luminescens SBML MML
pma00780 Prochlorococcus marinus SS120 SBML MML
pmb00780 Prochlorococcus marinus AS9601 SBML MML
pmc00780 Prochlorococcus marinus MIT 9515 SBML MML
pme00780 Prochlorococcus marinus NATL1A SBML MML
pmf00780 Prochlorococcus marinus MIT 9303 SBML MML
pmg00780 Prochlorococcus marinus MIT 9301 SBML MML
pmh00780 Prochlorococcus marinus MIT 9215 SBML MML
pmi00780 Prochlorococcus marinus MIT9312 SBML MML
pmj00780 Prochlorococcus marinus MIT 9211 SBML MML
pmm00780 Prochlorococcus marinus MED4 SBML MML
pmn00780 Prochlorococcus marinus NATL2A SBML MML
pmt00780 Prochlorococcus marinus MIT9313 SBML MML
pmu00780 Pasteurella multocida SBML MML
pmy00780 Pseudomonas mendocina SBML MML
pna00780 Polaromonas naphthalenivorans SBML MML
pne00780 Polynucleobacter necessarius SBML MML
pnu00780 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00780 Polaromonas sp. JS666 SBML MML
ppd00780 Pelobacter propionicus SBML MML
ppf00780 Pseudomonas putida F1 SBML MML
ppg00780 Pseudomonas putida GB-1 SBML MML
ppp00780 Physcomitrella patens subsp. patens SBML MML
ppr00780 Photobacterium profundum SBML MML
ppu00780 Pseudomonas putida KT2440 SBML MML
ppw00780 Pseudomonas putida W619 SBML MML
prw00780 Psychrobacter sp. PRwf-1 SBML MML
psa00780 Pseudomonas stutzeri SBML MML
psb00780 Pseudomonas syringae pv. syringae B728a SBML MML
psp00780 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00780 Pseudomonas syringae pv. tomato DC3000 SBML MML
pth00780 Pelotomaculum thermopropionicum SBML MML
ptr00780 Pan troglodytes (chimpanzee) SBML MML
pub00780 Candidatus Pelagibacter ubique SBML MML
pvi00780 Prosthecochloris vibrioformis SBML MML
rak00780 Rickettsia akari SBML MML
rba00780 Rhodopirellula baltica SBML MML
rbe00780 Rickettsia bellii RML369-C SBML MML
rbo00780 Rickettsia bellii OSU 85-389 SBML MML
rca00780 Roseiflexus castenholzii DSM13941 SBML MML
rci00780 Uncultured methanogenic archaeon RC-I SBML MML
rcm00780 Rickettsia canadensis SBML MML
rco00780 Rickettsia conorii SBML MML
rde00780 Roseobacter denitrificans SBML MML
rec00780 Rhizobium etli CIAT 652 SBML MML
reh00780 Ralstonia eutropha H16 SBML MML
ret00780 Rhizobium etli CFN 42 SBML MML
reu00780 Ralstonia eutropha JMP134 SBML MML
rfe00780 Rickettsia felis SBML MML
rfr00780 Rhodoferax ferrireducens SBML MML
rha00780 Rhodococcus sp. RHA1 SBML MML
rle00780 Rhizobium leguminosarum SBML MML
rma00780 Candidatus Ruthia magnifica SBML MML
rme00780 Ralstonia metallidurans SBML MML
rms00780 Rickettsia massiliae SBML MML
rno00780 Rattus norvegicus (rat) SBML MML
rpa00780 Rhodopseudomonas palustris CGA009 SBML MML
rpb00780 Rhodopseudomonas palustris HaA2 SBML MML
rpc00780 Rhodopseudomonas palustris BisB18 SBML MML
rpd00780 Rhodopseudomonas palustris BisB5 SBML MML
rpe00780 Rhodopseudomonas palustris BisA53 SBML MML
rpt00780 Rhodopseudomonas palustris TIE-1 SBML MML
rri00780 Rickettsia rickettsii Sheila Smith SBML MML
rrj00780 Rickettsia rickettsii Iowa SBML MML
rrs00780 Roseiflexus sp. RS-1 SBML MML
rru00780 Rhodospirillum rubrum SBML MML
rsa00780 Renibacterium salmoninarum SBML MML
rsh00780 Rhodobacter sphaeroides ATCC 17029 SBML MML
rso00780 Ralstonia solanacearum SBML MML
rsp00780 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00780 Rhodobacter sphaeroides ATCC 17025 SBML MML
rty00780 Rickettsia typhi SBML MML
saa00780 Staphylococcus aureus USA300 SBML MML
sab00780 Staphylococcus aureus RF122 SBML MML
sac00780 Staphylococcus aureus COL SBML MML
sae00780 Staphylococcus aureus Newman SBML MML
sag00780 Streptococcus agalactiae 2603 (serotype V) SBML MML
sah00780 Staphylococcus aureus JH1 SBML MML
sai00780 Sulfolobus acidocaldarius SBML MML
saj00780 Staphylococcus aureus JH9 SBML MML
sak00780 Streptococcus agalactiae A909 (serotype Ia) SBML MML
sal00780 Sphingopyxis alaskensis SBML MML
sam00780 Staphylococcus aureus MW2 SBML MML
san00780 Streptococcus agalactiae NEM316 (serotype III) SBML MML
sao00780 Staphylococcus aureus NCTC8325 SBML MML
saq00780 Salinispora arenicola SBML MML
sar00780 Staphylococcus aureus MRSA252 SBML MML
sas00780 Staphylococcus aureus MSSA476 SBML MML
sat00780 Syntrophus aciditrophicus SBML MML
sau00780 Staphylococcus aureus N315 SBML MML
sav00780 Staphylococcus aureus Mu50 SBML MML
saw00780 Staphylococcus aureus Mu3 SBML MML
sax00780 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00780 Shewanella amazonensis SBML MML
sbc00780 Shigella boydii CDC 3083-94 SBML MML
sbl00780 Shewanella baltica OS155 SBML MML
sbm00780 Shewanella baltica OS185 SBML MML
sbn00780 Shewanella baltica OS195 SBML MML
sbo00780 Shigella boydii Sb227 SBML MML
sce00780 Saccharomyces cerevisiae SBML MML
scl00780 Sorangium cellulosum SBML MML
sco00780 Streptomyces coelicolor SBML MML
sde00780 Saccharophagus degradans SBML MML
sdn00780 Shewanella denitrificans SBML MML
sdy00780 Shigella dysenteriae SBML MML
sec00780 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00780 Saccharopolyspora erythraea SBML MML
sep00780 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00780 Staphylococcus epidermidis RP62A SBML MML
ses00780 Salmonella enterica subsp. arizonae SBML MML
sfl00780 Shigella flexneri 301 (serotype 2a) SBML MML
sfr00780 Shewanella frigidimarina SBML MML
sfu00780 Syntrophobacter fumaroxidans SBML MML
sfv00780 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00780 Shigella flexneri 2457T (serotype 2a) SBML MML
sgl00780 Sodalis glossinidius SBML MML
sgo00780 Streptococcus gordonii SBML MML
sgr00780 Streptomyces griseus SBML MML
sha00780 Staphylococcus haemolyticus SBML MML
she00780 Shewanella sp. MR-4 SBML MML
shl00780 Shewanella halifaxensis SBML MML
shm00780 Shewanella sp. MR-7 SBML MML
shn00780 Shewanella sp. ANA-3 SBML MML
shw00780 Shewanella sp. W3-18-1 SBML MML
sil00780 Ruegeria pomeroyi SBML MML
sit00780 Silicibacter sp. TM1040 SBML MML
slo00780 Shewanella loihica SBML MML
sma00780 Streptomyces avermitilis SBML MML
smd00780 Sinorhizobium medicae SBML MML
sme00780 Sinorhizobium meliloti SBML MML
sml00780 Stenotrophomonas maltophilia SBML MML
smr00780 Staphylothermus marinus SBML MML
smu00780 Streptococcus mutans SBML MML
son00780 Shewanella oneidensis SBML MML
spa00780 Streptococcus pyogenes MGAS10394 (serotype M6) SBML MML
spb00780 Streptococcus pyogenes MGAS6180 (serotype M28) SBML MML
spc00780 Shewanella putrefaciens SBML MML
spd00780 Streptococcus pneumoniae D39 SBML MML
spe00780 Serratia proteamaculans SBML MML
spf00780 Streptococcus pyogenes Manfredo (serotype M5) SBML MML
spg00780 Streptococcus pyogenes MGAS315 (serotype M3) SBML MML
sph00780 Streptococcus pyogenes MGAS10270 (serotype M2) SBML MML
spi00780 Streptococcus pyogenes MGAS10750 (serotype M4) SBML MML
spj00780 Streptococcus pyogenes MGAS2096 (serotype M12) SBML MML
spk00780 Streptococcus pyogenes MGAS9429 (serotype M12) SBML MML
spl00780 Shewanella pealeana SBML MML
spm00780 Streptococcus pyogenes MGAS8232 (serotype M18) SBML MML
spn00780 Streptococcus pneumoniae TIGR4 SBML MML
spo00780 Schizosaccharomyces pombe SBML MML
spq00780 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spr00780 Streptococcus pneumoniae R6 SBML MML
sps00780 Streptococcus pyogenes SSI-1 (serotype M3) SBML MML
spt00780 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spv00780 Streptococcus pneumoniae Hungary19A 6 SBML MML
spw00780 Streptococcus pneumoniae CGSP14 (serotype 14) SBML MML
spy00780 Streptococcus pyogenes SF370 (serotype M1) SBML MML
spz00780 Streptococcus pyogenes MGAS5005 (serotype M1) SBML MML
sru00780 Salinibacter ruber SBML MML
ssa00780 Streptococcus sanguinis SBML MML
sse00780 Shewanella sediminis SBML MML
ssn00780 Shigella sonnei SBML MML
sso00780 Sulfolobus solfataricus SBML MML
ssp00780 Staphylococcus saprophyticus SBML MML
ssu00780 Streptococcus suis 05ZYH33 SBML MML
ssv00780 Streptococcus suis 98HAH33 SBML MML
stc00780 Streptococcus thermophilus CNRZ1066 SBML MML
ste00780 Streptococcus thermophilus LMD-9 SBML MML
sth00780 Symbiobacterium thermophilum SBML MML
stl00780 Streptococcus thermophilus LMG18311 SBML MML
stm00780 Salmonella typhimurium LT2 SBML MML
sto00780 Sulfolobus tokodaii SBML MML
stp00780 Salinispora tropica SBML MML
stt00780 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00780 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sul00780 Sulfurihydrogenibium sp. YO3AOP1 SBML MML
sun00780 Sulfurovum sp. NBC37-1 SBML MML
swd00780 Shewanella woodyi ATCC 51908 SBML MML
swi00780 Sphingomonas wittichii SBML MML
swo00780 Syntrophomonas wolfei SBML MML
syc00780 Synechococcus elongatus PCC6301 SBML MML
syd00780 Synechococcus sp. CC9605 SBML MML
sye00780 Synechococcus sp. CC9902 SBML MML
syf00780 Synechococcus elongatus PCC7942 SBML MML
syg00780 Synechococcus sp. CC9311 SBML MML
syn00780 Synechocystis sp. PCC6803 SBML MML
syp00780 Synechococcus sp. PCC7002 SBML MML
syr00780 Synechococcus sp. RCC307 SBML MML
syw00780 Synechococcus sp. WH8102 SBML MML
syx00780 Synechococcus sp. WH7803 SBML MML
tbd00780 Thiobacillus denitrificans SBML MML
tbr00780 Trypanosoma brucei SBML MML
tca00780 Tribolium castaneum (red flour beetle) SBML MML
tcr00780 Trypanosoma cruzi SBML MML
tcx00780 Thiomicrospira crunogena SBML MML
tde00780 Treponema denticola SBML MML
tdn00780 Thiomicrospira denitrificans SBML MML
tel00780 Thermosynechococcus elongatus SBML MML
ter00780 Trichodesmium erythraeum SBML MML
tet00780 Tetrahymena thermophila SBML MML
tex00780 Thermoanaerobacter sp. X514 SBML MML
tfu00780 Thermobifida fusca SBML MML
tko00780 Thermococcus kodakaraensis SBML MML
tle00780 Thermotoga lettingae SBML MML
tma00780 Thermotoga maritima SBML MML
tpd00780 Thermoanaerobacter pseudethanolicus SBML MML
tpe00780 Thermofilum pendens SBML MML
tpt00780 Thermotoga petrophila SBML MML
trq00780 Thermotoga sp. RQ2 SBML MML
tte00780 Thermoanaerobacter tengcongensis SBML MML
tth00780 Thermus thermophilus HB27 SBML MML
ttj00780 Thermus thermophilus HB8 SBML MML
tva00780 Trichomonas vaginalis SBML MML
twh00780 Tropheryma whipplei Twist SBML MML
tws00780 Tropheryma whipplei TW08/27 SBML MML
uma00780 Ustilago maydis SBML MML
vch00780 Vibrio cholerae O1 SBML MML
vco00780 Vibrio cholerae O395 SBML MML
vei00780 Verminephrobacter eiseniae SBML MML
vfi00780 Vibrio fischeri SBML MML
vha00780 Vibrio harveyi SBML MML
vok00780 Candidatus Vesicomyosocius okutanii SBML MML
vpa00780 Vibrio parahaemolyticus SBML MML
vpo00780 Vanderwaltozyma polyspora SBML MML
vvu00780 Vibrio vulnificus CMCP6 SBML MML
vvy00780 Vibrio vulnificus YJ016 SBML MML
wbm00780 Wolbachia wBm SBML MML
wbr00780 Wigglesworthia glossinidia SBML MML
wpi00780 Wolbachia pipientis SBML MML
wsu00780 Wolinella succinogenes SBML MML
xac00780 Xanthomonas axonopodis SBML MML
xau00780 Xanthobacter autotrophicus SBML MML
xcb00780 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00780 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00780 Xanthomonas campestris pv. vesicatoria SBML MML
xfa00780 Xylella fastidiosa 9a5c SBML MML
xfm00780 Xylella fastidiosa M12 SBML MML
xfn00780 Xylella fastidiosa M23 SBML MML
xft00780 Xylella fastidiosa Temecula1 SBML MML
xom00780 Xanthomonas oryzae MAFF311018 SBML MML
xoo00780 Xanthomonas oryzae KACC10331 SBML MML
yen00780 Yersinia enterocolitica SBML MML
yli00780 Yarrowia lipolytica SBML MML
ypa00780 Yersinia pestis Antiqua SBML MML
ype00780 Yersinia pestis CO92 SBML MML
ypg00780 Yersinia pestis Angola SBML MML
ypi00780 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00780 Yersinia pestis KIM SBML MML
ypm00780 Yersinia pestis Mediaevails SBML MML
ypn00780 Yersinia pestis Nepal516 SBML MML
ypp00780 Yersinia pestis Pestoides SBML MML
yps00780 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00780 Yersinia pseudotuberculosis YPIII SBML MML
zmo00780 Zymomonas mobilis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.