This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00906: Carotenoid biosynthesis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aau00906 Arthrobacter aurescens SBML MML
aba00906 Acidobacteria bacterium SBML MML
acl00906 Acholeplasma laidlawii SBML MML
amr00906 Acaryochloris marina SBML MML
ana00906 Anabaena sp. PCC7120 SBML MML
ath00906 Arabidopsis thaliana (thale cress) SBML MML
ava00906 Anabaena variabilis SBML MML
bba00906 Bdellovibrio bacteriovorus SBML MML
bbt00906 Bradyrhizobium sp. BTAi1 SBML MML
bpu00906 Bacillus pumilus SBML MML
bra00906 Bradyrhizobium sp. ORS278 SBML MML
cak00906 Caulobacter sp. K31 SBML MML
cau00906 Chloroflexus aurantiacus SBML MML
cch00906 Chlorobium chlorochromatii SBML MML
chu00906 Cytophaga hutchinsonii SBML MML
cme00906 Cyanidioschyzon merolae SBML MML
cpb00906 Chlorobium phaeobacteroides BS1 SBML MML
cph00906 Chlorobium phaeobacteroides DSM 266 SBML MML
cre00906 Chlamydomonas reinhardtii SBML MML
cte00906 Chlorobaculum tepidum SBML MML
cya00906 Cyanobacteria Yellowstone A-Prime SBML MML
cyb00906 Cyanobacteria Yellowstone B-Prime SBML MML
cyt00906 Cyanothece sp. ATCC 51142 SBML MML
dge00906 Deinococcus geothermalis SBML MML
dota00906 Ostreococcus tauri SBML MML
dpop00906 (Undocumented) SBML MML
dra00906 Deinococcus radiodurans SBML MML
dsh00906 Dinoroseobacter shibae SBML MML
dvvi00906 (Undocumented) SBML MML
eacp00906 (Undocumented) SBML MML
eath00906 Arabidopsis thaliana (thale cress) (EST) SBML MML
ebna00906 Brassica napus (rape) (EST) SBML MML
ebvl00906 Beta vulgaris (beet) (EST) SBML MML
ecan00906 Capsicum annuum (chile pepper) (EST) SBML MML
ecsi00906 Citrus sinensis (Valencia orange) (EST) SBML MML
eees00906 Euphorbia esula (leafy spurge) (EST) SBML MML
efar00906 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00906 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00906 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00906 Glycine max (soybean) (EST) SBML MML
egra00906 Gossypium raimondii (EST) SBML MML
ehan00906 Helianthus annuus (sunflower) (EST) SBML MML
ehvu00906 Hordeum vulgare (barley) (EST) SBML MML
eini00906 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00906 Erythrobacter litoralis SBML MML
elja00906 Lotus japonicus (lotus) (EST) SBML MML
elpe00906 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00906 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00906 Lactuca sativa (lettuce) (EST) SBML MML
elvi00906 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00906 Manihot esculenta (cassava) (EST) SBML MML
emtr00906 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00906 Nicotiana benthamiana (EST) SBML MML
enta00906 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00906 Oryza sativa (rice) (EST) SBML MML
eosi00906 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00906 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00906 Picea glauca (white spruce) (EST) SBML MML
epop00906 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00906 (Undocumented) SBML MML
eppi00906 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00906 Physcomitrella patens subsp. patens (EST) SBML MML
epps00906 Prunus persica (peach) (EST) SBML MML
epsi00906 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00906 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00906 Populus tremula (European aspen) (EST) SBML MML
esa00906 Enterobacter sakazakii SBML MML
esbi00906 Sorghum bicolor (sorghum) (EST) SBML MML
esly00906 Solanum lycopersicum (tomato) (EST) SBML MML
esof00906 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00906 (Undocumented) SBML MML
estu00906 Solanum tuberosum (potato) (EST) SBML MML
etae00906 Triticum aestivum (wheat) (EST) SBML MML
evvi00906 Vitis vinifera (wine grape) (EST) SBML MML
ezel00906 (Undocumented) SBML MML
ezma00906 Zea mays (maize) (EST) SBML MML
gfo00906 Gramella forsetii SBML MML
gvi00906 Gloeobacter violaceus SBML MML
hal00906 Halobacterium sp. NRC-1 SBML MML
hau00906 Herpetosiphon aurantiacus SBML MML
hha00906 Halorhodospira halophila SBML MML
hma00906 Haloarcula marismortui SBML MML
hsl00906 Halobacterium salinarum R1 SBML MML
hwa00906 Haloquadratum walsbyi SBML MML
jan00906 Jannaschia sp. CCS1 SBML MML
kcr00906 Candidatus Korarchaeum cryptofilum SBML MML
kra00906 Kineococcus radiotolerans SBML MML
krh00906 Kocuria rhizophila SBML MML
lbl00906 Leptospira borgpetersenii L550 SBML MML
lme00906 Leuconostoc mesenteroides SBML MML
lpl00906 Lactobacillus plantarum WCFS1 SBML MML
mar00906 Microcystis aeruginosa SBML MML
mav00906 Mycobacterium avium 104 SBML MML
mem00906 Methanoculleus marisnigri SBML MML
met00906 Methylobacterium sp. 4-46 SBML MML
mex00906 Methylobacterium extorquens SBML MML
mgi00906 Mycobacterium gilvum SBML MML
mmi00906 Mycobacterium marinum M SBML MML
mpa00906 Mycobacterium avium paratuberculosis SBML MML
mrd00906 Methylobacterium radiotolerans SBML MML
mse00906 Metallosphaera sedula SBML MML
msm00906 Mycobacterium smegmatis SBML MML
mth00906 Methanobacterium thermoautotrophicum SBML MML
mva00906 Mycobacterium vanbaalenii SBML MML
mxa00906 Myxococcus xanthus SBML MML
nar00906 Novosphingobium aromaticivorans SBML MML
nfa00906 Nocardia farcinica SBML MML
nph00906 Natronomonas pharaonis SBML MML
npu00906 Nostoc punctiforme SBML MML
olu00906 Ostreococcus lucimarinus SBML MML
osa00906 Oryza sativa japonica (Japanese rice) SBML MML
ote00906 Opitutus terrae SBML MML
pen00906 Pseudomonas entomophila SBML MML
plt00906 Pelodictyon luteolum SBML MML
plu00906 Photorhabdus luminescens SBML MML
pma00906 Prochlorococcus marinus SS120 SBML MML
pmb00906 Prochlorococcus marinus AS9601 SBML MML
pmc00906 Prochlorococcus marinus MIT 9515 SBML MML
pme00906 Prochlorococcus marinus NATL1A SBML MML
pmf00906 Prochlorococcus marinus MIT 9303 SBML MML
pmg00906 Prochlorococcus marinus MIT 9301 SBML MML
pmh00906 Prochlorococcus marinus MIT 9215 SBML MML
pmi00906 Prochlorococcus marinus MIT9312 SBML MML
pmj00906 Prochlorococcus marinus MIT 9211 SBML MML
pmm00906 Prochlorococcus marinus MED4 SBML MML
pmn00906 Prochlorococcus marinus NATL2A SBML MML
pmt00906 Prochlorococcus marinus MIT9313 SBML MML
ppp00906 Physcomitrella patens subsp. patens SBML MML
ppu00906 Pseudomonas putida KT2440 SBML MML
psa00906 Pseudomonas stutzeri SBML MML
pto00906 Picrophilus torridus SBML MML
pub00906 Candidatus Pelagibacter ubique SBML MML
pvi00906 Prosthecochloris vibrioformis SBML MML
rba00906 Rhodopirellula baltica SBML MML
rca00906 Roseiflexus castenholzii DSM13941 SBML MML
rde00906 Roseobacter denitrificans SBML MML
rha00906 Rhodococcus sp. RHA1 SBML MML
rpa00906 Rhodopseudomonas palustris CGA009 SBML MML
rpb00906 Rhodopseudomonas palustris HaA2 SBML MML
rpc00906 Rhodopseudomonas palustris BisB18 SBML MML
rpd00906 Rhodopseudomonas palustris BisB5 SBML MML
rpe00906 Rhodopseudomonas palustris BisA53 SBML MML
rpt00906 Rhodopseudomonas palustris TIE-1 SBML MML
rrs00906 Roseiflexus sp. RS-1 SBML MML
rru00906 Rhodospirillum rubrum SBML MML
rsh00906 Rhodobacter sphaeroides ATCC 17029 SBML MML
rsp00906 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00906 Rhodobacter sphaeroides ATCC 17025 SBML MML
rxy00906 Rubrobacter xylanophilus SBML MML
saa00906 Staphylococcus aureus USA300 SBML MML
sab00906 Staphylococcus aureus RF122 SBML MML
sac00906 Staphylococcus aureus COL SBML MML
sae00906 Staphylococcus aureus Newman SBML MML
sai00906 Sulfolobus acidocaldarius SBML MML
sal00906 Sphingopyxis alaskensis SBML MML
sam00906 Staphylococcus aureus MW2 SBML MML
sao00906 Staphylococcus aureus NCTC8325 SBML MML
saq00906 Salinispora arenicola SBML MML
sar00906 Staphylococcus aureus MRSA252 SBML MML
sas00906 Staphylococcus aureus MSSA476 SBML MML
sau00906 Staphylococcus aureus N315 SBML MML
sav00906 Staphylococcus aureus Mu50 SBML MML
saw00906 Staphylococcus aureus Mu3 SBML MML
sax00906 Staphylococcus aureus USA300 TCH1516 SBML MML
scl00906 Sorangium cellulosum SBML MML
sco00906 Streptomyces coelicolor SBML MML
sen00906 Saccharopolyspora erythraea SBML MML
sgr00906 Streptomyces griseus SBML MML
sha00906 Staphylococcus haemolyticus SBML MML
sma00906 Streptomyces avermitilis SBML MML
sru00906 Salinibacter ruber SBML MML
sso00906 Sulfolobus solfataricus SBML MML
stp00906 Salinispora tropica SBML MML
syc00906 Synechococcus elongatus PCC6301 SBML MML
syd00906 Synechococcus sp. CC9605 SBML MML
sye00906 Synechococcus sp. CC9902 SBML MML
syf00906 Synechococcus elongatus PCC7942 SBML MML
syg00906 Synechococcus sp. CC9311 SBML MML
syn00906 Synechocystis sp. PCC6803 SBML MML
syp00906 Synechococcus sp. PCC7002 SBML MML
syr00906 Synechococcus sp. RCC307 SBML MML
syw00906 Synechococcus sp. WH8102 SBML MML
syx00906 Synechococcus sp. WH7803 SBML MML
tel00906 Thermosynechococcus elongatus SBML MML
ter00906 Trichodesmium erythraeum SBML MML
tfu00906 Thermobifida fusca SBML MML
tth00906 Thermus thermophilus HB27 SBML MML
ttj00906 Thermus thermophilus HB8 SBML MML
vha00906 Vibrio harveyi SBML MML
xau00906 Xanthobacter autotrophicus SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.