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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism bhe: Bartonella henselae

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
bhe00010 Glycolysis / Gluconeogenesis SBML MML
bhe00020 Citrate cycle (TCA cycle) SBML MML
bhe00030 Pentose phosphate pathway SBML MML
bhe00040 Pentose and glucuronate interconversions SBML MML
bhe00051 Fructose and mannose metabolism SBML MML
bhe00052 Galactose metabolism SBML MML
bhe00061 Fatty acid biosynthesis SBML MML
bhe00071 Fatty acid metabolism SBML MML
bhe00100 (Undocumented) SBML MML
bhe00120 (Undocumented) SBML MML
bhe00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
bhe00220 (Undocumented) SBML MML
bhe00230 Purine metabolism SBML MML
bhe00240 Pyrimidine metabolism SBML MML
bhe00251 (Undocumented) SBML MML
bhe00252 (Undocumented) SBML MML
bhe00260 Glycine, serine and threonine metabolism SBML MML
bhe00271 (Undocumented) SBML MML
bhe00272 (Undocumented) SBML MML
bhe00280 Valine, leucine and isoleucine degradation SBML MML
bhe00290 Valine, leucine and isoleucine biosynthesis SBML MML
bhe00300 Lysine biosynthesis SBML MML
bhe00310 Lysine degradation SBML MML
bhe00330 Arginine and proline metabolism SBML MML
bhe00340 Histidine metabolism SBML MML
bhe00350 Tyrosine metabolism SBML MML
bhe00380 Tryptophan metabolism SBML MML
bhe00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
bhe00401 Novobiocin biosynthesis SBML MML
bhe00410 beta-Alanine metabolism SBML MML
bhe00450 Selenoamino acid metabolism SBML MML
bhe00460 (Undocumented) SBML MML
bhe00471 D-Glutamine and D-glutamate metabolism SBML MML
bhe00473 D-Alanine metabolism SBML MML
bhe00480 Glutathione metabolism SBML MML
bhe00500 Starch and sucrose metabolism SBML MML
bhe00521 Streptomycin biosynthesis SBML MML
bhe00530 (Undocumented) SBML MML
bhe00540 Lipopolysaccharide biosynthesis SBML MML
bhe00550 Peptidoglycan biosynthesis SBML MML
bhe00561 Glycerolipid metabolism SBML MML
bhe00562 Inositol phosphate metabolism SBML MML
bhe00564 Glycerophospholipid metabolism SBML MML
bhe00620 Pyruvate metabolism SBML MML
bhe00624 1- and 2-Methylnaphthalene degradation SBML MML
bhe00626 Naphthalene and anthracene degradation SBML MML
bhe00628 Fluorene degradation SBML MML
bhe00630 Glyoxylate and dicarboxylate metabolism SBML MML
bhe00632 (Undocumented) SBML MML
bhe00640 Propanoate metabolism SBML MML
bhe00641 3-Chloroacrylic acid degradation SBML MML
bhe00650 Butanoate metabolism SBML MML
bhe00660 C5-Branched dibasic acid metabolism SBML MML
bhe00670 One carbon pool by folate SBML MML
bhe00710 (Undocumented) SBML MML
bhe00720 (Undocumented) SBML MML
bhe00730 Thiamine metabolism SBML MML
bhe00740 Riboflavin metabolism SBML MML
bhe00750 Vitamin B6 metabolism SBML MML
bhe00760 Nicotinate and nicotinamide metabolism SBML MML
bhe00770 Pantothenate and CoA biosynthesis SBML MML
bhe00780 Biotin metabolism SBML MML
bhe00785 Lipoic acid metabolism SBML MML
bhe00790 Folate biosynthesis SBML MML
bhe00860 Porphyrin and chlorophyll metabolism SBML MML
bhe00900 Terpenoid backbone biosynthesis SBML MML
bhe00903 (Undocumented) SBML MML
bhe00910 Nitrogen metabolism SBML MML
bhe00940 (Undocumented) SBML MML
bhe00950 (Undocumented) SBML MML
bhe00970 Aminoacyl-tRNA biosynthesis SBML MML
bhe00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
bhe00982 (Undocumented) SBML MML
bhe00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.