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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism btk: Bacillus thuringiensis 97-27

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
btk00010 Glycolysis / Gluconeogenesis SBML MML
btk00020 Citrate cycle (TCA cycle) SBML MML
btk00030 Pentose phosphate pathway SBML MML
btk00031 (Undocumented) SBML MML
btk00040 Pentose and glucuronate interconversions SBML MML
btk00051 Fructose and mannose metabolism SBML MML
btk00052 Galactose metabolism SBML MML
btk00053 Ascorbate and aldarate metabolism SBML MML
btk00061 Fatty acid biosynthesis SBML MML
btk00071 Fatty acid metabolism SBML MML
btk00072 Synthesis and degradation of ketone bodies SBML MML
btk00100 (Undocumented) SBML MML
btk00120 (Undocumented) SBML MML
btk00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
btk00150 Androgen and estrogen metabolism SBML MML
btk00220 (Undocumented) SBML MML
btk00230 Purine metabolism SBML MML
btk00240 Pyrimidine metabolism SBML MML
btk00251 (Undocumented) SBML MML
btk00252 (Undocumented) SBML MML
btk00260 Glycine, serine and threonine metabolism SBML MML
btk00271 (Undocumented) SBML MML
btk00272 (Undocumented) SBML MML
btk00280 Valine, leucine and isoleucine degradation SBML MML
btk00281 Geraniol degradation SBML MML
btk00290 Valine, leucine and isoleucine biosynthesis SBML MML
btk00300 Lysine biosynthesis SBML MML
btk00310 Lysine degradation SBML MML
btk00311 Penicillin and cephalosporin biosynthesis SBML MML
btk00330 Arginine and proline metabolism SBML MML
btk00340 Histidine metabolism SBML MML
btk00350 Tyrosine metabolism SBML MML
btk00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
btk00360 Phenylalanine metabolism SBML MML
btk00361 gamma-Hexachlorocyclohexane degradation SBML MML
btk00362 (Undocumented) SBML MML
btk00363 Bisphenol A degradation SBML MML
btk00380 Tryptophan metabolism SBML MML
btk00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
btk00401 Novobiocin biosynthesis SBML MML
btk00410 beta-Alanine metabolism SBML MML
btk00430 Taurine and hypotaurine metabolism SBML MML
btk00440 Phosphonate and phosphinate metabolism SBML MML
btk00450 Selenoamino acid metabolism SBML MML
btk00460 (Undocumented) SBML MML
btk00471 D-Glutamine and D-glutamate metabolism SBML MML
btk00472 D-Arginine and D-ornithine metabolism SBML MML
btk00473 D-Alanine metabolism SBML MML
btk00480 Glutathione metabolism SBML MML
btk00500 Starch and sucrose metabolism SBML MML
btk00510 (Undocumented) SBML MML
btk00520 Amino sugar and nucleotide sugar metabolism SBML MML
btk00521 Streptomycin biosynthesis SBML MML
btk00523 Polyketide sugar unit biosynthesis SBML MML
btk00530 (Undocumented) SBML MML
btk00550 Peptidoglycan biosynthesis SBML MML
btk00561 Glycerolipid metabolism SBML MML
btk00562 Inositol phosphate metabolism SBML MML
btk00564 Glycerophospholipid metabolism SBML MML
btk00565 Ether lipid metabolism SBML MML
btk00590 Arachidonic acid metabolism SBML MML
btk00620 Pyruvate metabolism SBML MML
btk00622 Toluene and xylene degradation SBML MML
btk00624 1- and 2-Methylnaphthalene degradation SBML MML
btk00626 Naphthalene and anthracene degradation SBML MML
btk00627 1,4-Dichlorobenzene degradation SBML MML
btk00630 Glyoxylate and dicarboxylate metabolism SBML MML
btk00631 1,2-Dichloroethane degradation SBML MML
btk00632 (Undocumented) SBML MML
btk00640 Propanoate metabolism SBML MML
btk00641 3-Chloroacrylic acid degradation SBML MML
btk00643 Styrene degradation SBML MML
btk00650 Butanoate metabolism SBML MML
btk00660 C5-Branched dibasic acid metabolism SBML MML
btk00670 One carbon pool by folate SBML MML
btk00680 Methane metabolism SBML MML
btk00710 (Undocumented) SBML MML
btk00720 (Undocumented) SBML MML
btk00730 Thiamine metabolism SBML MML
btk00740 Riboflavin metabolism SBML MML
btk00750 Vitamin B6 metabolism SBML MML
btk00760 Nicotinate and nicotinamide metabolism SBML MML
btk00770 Pantothenate and CoA biosynthesis SBML MML
btk00780 Biotin metabolism SBML MML
btk00785 Lipoic acid metabolism SBML MML
btk00790 Folate biosynthesis SBML MML
btk00860 Porphyrin and chlorophyll metabolism SBML MML
btk00900 Terpenoid backbone biosynthesis SBML MML
btk00903 (Undocumented) SBML MML
btk00910 Nitrogen metabolism SBML MML
btk00920 Sulfur metabolism SBML MML
btk00930 Caprolactam degradation SBML MML
btk00960 (Undocumented) SBML MML
btk00970 Aminoacyl-tRNA biosynthesis SBML MML
btk00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
btk00982 (Undocumented) SBML MML
btk00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.