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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cje: Campylobacter jejuni NCTC11168

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cje00010 Glycolysis / Gluconeogenesis SBML MML
cje00020 Citrate cycle (TCA cycle) SBML MML
cje00030 Pentose phosphate pathway SBML MML
cje00040 Pentose and glucuronate interconversions SBML MML
cje00051 Fructose and mannose metabolism SBML MML
cje00052 Galactose metabolism SBML MML
cje00061 Fatty acid biosynthesis SBML MML
cje00100 (Undocumented) SBML MML
cje00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cje00220 (Undocumented) SBML MML
cje00230 Purine metabolism SBML MML
cje00240 Pyrimidine metabolism SBML MML
cje00251 (Undocumented) SBML MML
cje00252 (Undocumented) SBML MML
cje00260 Glycine, serine and threonine metabolism SBML MML
cje00271 (Undocumented) SBML MML
cje00272 (Undocumented) SBML MML
cje00280 Valine, leucine and isoleucine degradation SBML MML
cje00290 Valine, leucine and isoleucine biosynthesis SBML MML
cje00300 Lysine biosynthesis SBML MML
cje00330 Arginine and proline metabolism SBML MML
cje00340 Histidine metabolism SBML MML
cje00350 Tyrosine metabolism SBML MML
cje00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
cje00360 Phenylalanine metabolism SBML MML
cje00362 (Undocumented) SBML MML
cje00380 Tryptophan metabolism SBML MML
cje00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cje00401 Novobiocin biosynthesis SBML MML
cje00410 beta-Alanine metabolism SBML MML
cje00430 Taurine and hypotaurine metabolism SBML MML
cje00450 Selenoamino acid metabolism SBML MML
cje00460 (Undocumented) SBML MML
cje00471 D-Glutamine and D-glutamate metabolism SBML MML
cje00473 D-Alanine metabolism SBML MML
cje00500 Starch and sucrose metabolism SBML MML
cje00520 Amino sugar and nucleotide sugar metabolism SBML MML
cje00521 Streptomycin biosynthesis SBML MML
cje00523 Polyketide sugar unit biosynthesis SBML MML
cje00530 (Undocumented) SBML MML
cje00540 Lipopolysaccharide biosynthesis SBML MML
cje00550 Peptidoglycan biosynthesis SBML MML
cje00561 Glycerolipid metabolism SBML MML
cje00564 Glycerophospholipid metabolism SBML MML
cje00620 Pyruvate metabolism SBML MML
cje00628 Fluorene degradation SBML MML
cje00630 Glyoxylate and dicarboxylate metabolism SBML MML
cje00632 (Undocumented) SBML MML
cje00640 Propanoate metabolism SBML MML
cje00650 Butanoate metabolism SBML MML
cje00660 C5-Branched dibasic acid metabolism SBML MML
cje00670 One carbon pool by folate SBML MML
cje00680 Methane metabolism SBML MML
cje00710 (Undocumented) SBML MML
cje00720 (Undocumented) SBML MML
cje00730 Thiamine metabolism SBML MML
cje00740 Riboflavin metabolism SBML MML
cje00750 Vitamin B6 metabolism SBML MML
cje00760 Nicotinate and nicotinamide metabolism SBML MML
cje00770 Pantothenate and CoA biosynthesis SBML MML
cje00780 Biotin metabolism SBML MML
cje00790 Folate biosynthesis SBML MML
cje00860 Porphyrin and chlorophyll metabolism SBML MML
cje00900 Terpenoid backbone biosynthesis SBML MML
cje00910 Nitrogen metabolism SBML MML
cje00920 Sulfur metabolism SBML MML
cje00930 Caprolactam degradation SBML MML
cje00940 (Undocumented) SBML MML
cje00950 (Undocumented) SBML MML
cje00970 Aminoacyl-tRNA biosynthesis SBML MML
cje00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.