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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cpt: Chlamydophila pneumoniae TW183

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cpt00010 Glycolysis / Gluconeogenesis SBML MML
cpt00020 Citrate cycle (TCA cycle) SBML MML
cpt00030 Pentose phosphate pathway SBML MML
cpt00051 Fructose and mannose metabolism SBML MML
cpt00061 Fatty acid biosynthesis SBML MML
cpt00100 (Undocumented) SBML MML
cpt00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cpt00230 Purine metabolism SBML MML
cpt00240 Pyrimidine metabolism SBML MML
cpt00251 (Undocumented) SBML MML
cpt00252 (Undocumented) SBML MML
cpt00260 Glycine, serine and threonine metabolism SBML MML
cpt00271 (Undocumented) SBML MML
cpt00272 (Undocumented) SBML MML
cpt00280 Valine, leucine and isoleucine degradation SBML MML
cpt00290 Valine, leucine and isoleucine biosynthesis SBML MML
cpt00300 Lysine biosynthesis SBML MML
cpt00310 Lysine degradation SBML MML
cpt00330 Arginine and proline metabolism SBML MML
cpt00340 Histidine metabolism SBML MML
cpt00350 Tyrosine metabolism SBML MML
cpt00380 Tryptophan metabolism SBML MML
cpt00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cpt00450 Selenoamino acid metabolism SBML MML
cpt00471 D-Glutamine and D-glutamate metabolism SBML MML
cpt00500 Starch and sucrose metabolism SBML MML
cpt00530 (Undocumented) SBML MML
cpt00540 Lipopolysaccharide biosynthesis SBML MML
cpt00550 Peptidoglycan biosynthesis SBML MML
cpt00561 Glycerolipid metabolism SBML MML
cpt00564 Glycerophospholipid metabolism SBML MML
cpt00620 Pyruvate metabolism SBML MML
cpt00630 Glyoxylate and dicarboxylate metabolism SBML MML
cpt00632 (Undocumented) SBML MML
cpt00640 Propanoate metabolism SBML MML
cpt00650 Butanoate metabolism SBML MML
cpt00670 One carbon pool by folate SBML MML
cpt00710 (Undocumented) SBML MML
cpt00720 (Undocumented) SBML MML
cpt00730 Thiamine metabolism SBML MML
cpt00740 Riboflavin metabolism SBML MML
cpt00760 Nicotinate and nicotinamide metabolism SBML MML
cpt00770 Pantothenate and CoA biosynthesis SBML MML
cpt00780 Biotin metabolism SBML MML
cpt00785 Lipoic acid metabolism SBML MML
cpt00790 Folate biosynthesis SBML MML
cpt00860 Porphyrin and chlorophyll metabolism SBML MML
cpt00900 Terpenoid backbone biosynthesis SBML MML
cpt00920 Sulfur metabolism SBML MML
cpt00970 Aminoacyl-tRNA biosynthesis SBML MML
cpt00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.