This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cte: Chlorobaculum tepidum

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cte00010 Glycolysis / Gluconeogenesis SBML MML
cte00020 Citrate cycle (TCA cycle) SBML MML
cte00030 Pentose phosphate pathway SBML MML
cte00040 Pentose and glucuronate interconversions SBML MML
cte00051 Fructose and mannose metabolism SBML MML
cte00052 Galactose metabolism SBML MML
cte00053 Ascorbate and aldarate metabolism SBML MML
cte00061 Fatty acid biosynthesis SBML MML
cte00071 Fatty acid metabolism SBML MML
cte00100 (Undocumented) SBML MML
cte00120 (Undocumented) SBML MML
cte00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cte00220 (Undocumented) SBML MML
cte00230 Purine metabolism SBML MML
cte00240 Pyrimidine metabolism SBML MML
cte00251 (Undocumented) SBML MML
cte00252 (Undocumented) SBML MML
cte00260 Glycine, serine and threonine metabolism SBML MML
cte00271 (Undocumented) SBML MML
cte00272 (Undocumented) SBML MML
cte00280 Valine, leucine and isoleucine degradation SBML MML
cte00281 Geraniol degradation SBML MML
cte00290 Valine, leucine and isoleucine biosynthesis SBML MML
cte00300 Lysine biosynthesis SBML MML
cte00330 Arginine and proline metabolism SBML MML
cte00340 Histidine metabolism SBML MML
cte00350 Tyrosine metabolism SBML MML
cte00360 Phenylalanine metabolism SBML MML
cte00380 Tryptophan metabolism SBML MML
cte00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cte00401 Novobiocin biosynthesis SBML MML
cte00410 beta-Alanine metabolism SBML MML
cte00430 Taurine and hypotaurine metabolism SBML MML
cte00450 Selenoamino acid metabolism SBML MML
cte00471 D-Glutamine and D-glutamate metabolism SBML MML
cte00473 D-Alanine metabolism SBML MML
cte00480 Glutathione metabolism SBML MML
cte00500 Starch and sucrose metabolism SBML MML
cte00520 Amino sugar and nucleotide sugar metabolism SBML MML
cte00521 Streptomycin biosynthesis SBML MML
cte00523 Polyketide sugar unit biosynthesis SBML MML
cte00530 (Undocumented) SBML MML
cte00540 Lipopolysaccharide biosynthesis SBML MML
cte00550 Peptidoglycan biosynthesis SBML MML
cte00561 Glycerolipid metabolism SBML MML
cte00562 Inositol phosphate metabolism SBML MML
cte00564 Glycerophospholipid metabolism SBML MML
cte00620 Pyruvate metabolism SBML MML
cte00624 1- and 2-Methylnaphthalene degradation SBML MML
cte00625 (Undocumented) SBML MML
cte00626 Naphthalene and anthracene degradation SBML MML
cte00630 Glyoxylate and dicarboxylate metabolism SBML MML
cte00632 (Undocumented) SBML MML
cte00640 Propanoate metabolism SBML MML
cte00641 3-Chloroacrylic acid degradation SBML MML
cte00650 Butanoate metabolism SBML MML
cte00660 C5-Branched dibasic acid metabolism SBML MML
cte00670 One carbon pool by folate SBML MML
cte00680 Methane metabolism SBML MML
cte00710 (Undocumented) SBML MML
cte00720 (Undocumented) SBML MML
cte00730 Thiamine metabolism SBML MML
cte00740 Riboflavin metabolism SBML MML
cte00750 Vitamin B6 metabolism SBML MML
cte00760 Nicotinate and nicotinamide metabolism SBML MML
cte00770 Pantothenate and CoA biosynthesis SBML MML
cte00780 Biotin metabolism SBML MML
cte00785 Lipoic acid metabolism SBML MML
cte00790 Folate biosynthesis SBML MML
cte00860 Porphyrin and chlorophyll metabolism SBML MML
cte00900 Terpenoid backbone biosynthesis SBML MML
cte00903 (Undocumented) SBML MML
cte00906 Carotenoid biosynthesis SBML MML
cte00910 Nitrogen metabolism SBML MML
cte00920 Sulfur metabolism SBML MML
cte00941 (Undocumented) SBML MML
cte00970 Aminoacyl-tRNA biosynthesis SBML MML
cte00982 (Undocumented) SBML MML
cte00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.