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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism dme: Drosophila melanogaster (fruit fly)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
dme00010 Glycolysis / Gluconeogenesis SBML MML
dme00020 Citrate cycle (TCA cycle) SBML MML
dme00030 Pentose phosphate pathway SBML MML
dme00031 (Undocumented) SBML MML
dme00040 Pentose and glucuronate interconversions SBML MML
dme00051 Fructose and mannose metabolism SBML MML
dme00052 Galactose metabolism SBML MML
dme00053 Ascorbate and aldarate metabolism SBML MML
dme00061 Fatty acid biosynthesis SBML MML
dme00062 Fatty acid elongation in mitochondria SBML MML
dme00071 Fatty acid metabolism SBML MML
dme00072 Synthesis and degradation of ketone bodies SBML MML
dme00100 (Undocumented) SBML MML
dme00120 (Undocumented) SBML MML
dme00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
dme00140 (Undocumented) SBML MML
dme00150 Androgen and estrogen metabolism SBML MML
dme00220 (Undocumented) SBML MML
dme00230 Purine metabolism SBML MML
dme00240 Pyrimidine metabolism SBML MML
dme00251 (Undocumented) SBML MML
dme00252 (Undocumented) SBML MML
dme00260 Glycine, serine and threonine metabolism SBML MML
dme00271 (Undocumented) SBML MML
dme00272 (Undocumented) SBML MML
dme00280 Valine, leucine and isoleucine degradation SBML MML
dme00281 Geraniol degradation SBML MML
dme00290 Valine, leucine and isoleucine biosynthesis SBML MML
dme00300 Lysine biosynthesis SBML MML
dme00310 Lysine degradation SBML MML
dme00330 Arginine and proline metabolism SBML MML
dme00340 Histidine metabolism SBML MML
dme00350 Tyrosine metabolism SBML MML
dme00360 Phenylalanine metabolism SBML MML
dme00361 gamma-Hexachlorocyclohexane degradation SBML MML
dme00362 (Undocumented) SBML MML
dme00363 Bisphenol A degradation SBML MML
dme00380 Tryptophan metabolism SBML MML
dme00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
dme00401 Novobiocin biosynthesis SBML MML
dme00410 beta-Alanine metabolism SBML MML
dme00430 Taurine and hypotaurine metabolism SBML MML
dme00440 Phosphonate and phosphinate metabolism SBML MML
dme00450 Selenoamino acid metabolism SBML MML
dme00460 (Undocumented) SBML MML
dme00471 D-Glutamine and D-glutamate metabolism SBML MML
dme00472 D-Arginine and D-ornithine metabolism SBML MML
dme00480 Glutathione metabolism SBML MML
dme00500 Starch and sucrose metabolism SBML MML
dme00510 (Undocumented) SBML MML
dme00520 Amino sugar and nucleotide sugar metabolism SBML MML
dme00521 Streptomycin biosynthesis SBML MML
dme00530 (Undocumented) SBML MML
dme00550 Peptidoglycan biosynthesis SBML MML
dme00561 Glycerolipid metabolism SBML MML
dme00562 Inositol phosphate metabolism SBML MML
dme00564 Glycerophospholipid metabolism SBML MML
dme00565 Ether lipid metabolism SBML MML
dme00590 Arachidonic acid metabolism SBML MML
dme00591 Linoleic acid metabolism SBML MML
dme00592 alpha-Linolenic acid metabolism SBML MML
dme00600 Sphingolipid metabolism SBML MML
dme00620 Pyruvate metabolism SBML MML
dme00624 1- and 2-Methylnaphthalene degradation SBML MML
dme00625 (Undocumented) SBML MML
dme00626 Naphthalene and anthracene degradation SBML MML
dme00630 Glyoxylate and dicarboxylate metabolism SBML MML
dme00632 (Undocumented) SBML MML
dme00640 Propanoate metabolism SBML MML
dme00641 3-Chloroacrylic acid degradation SBML MML
dme00642 Ethylbenzene degradation SBML MML
dme00643 Styrene degradation SBML MML
dme00650 Butanoate metabolism SBML MML
dme00670 One carbon pool by folate SBML MML
dme00680 Methane metabolism SBML MML
dme00710 (Undocumented) SBML MML
dme00720 (Undocumented) SBML MML
dme00730 Thiamine metabolism SBML MML
dme00740 Riboflavin metabolism SBML MML
dme00750 Vitamin B6 metabolism SBML MML
dme00760 Nicotinate and nicotinamide metabolism SBML MML
dme00770 Pantothenate and CoA biosynthesis SBML MML
dme00780 Biotin metabolism SBML MML
dme00785 Lipoic acid metabolism SBML MML
dme00790 Folate biosynthesis SBML MML
dme00860 Porphyrin and chlorophyll metabolism SBML MML
dme00900 Terpenoid backbone biosynthesis SBML MML
dme00901 (Undocumented) SBML MML
dme00903 (Undocumented) SBML MML
dme00910 Nitrogen metabolism SBML MML
dme00920 Sulfur metabolism SBML MML
dme00930 Caprolactam degradation SBML MML
dme00940 (Undocumented) SBML MML
dme00950 (Undocumented) SBML MML
dme00960 (Undocumented) SBML MML
dme00970 Aminoacyl-tRNA biosynthesis SBML MML
dme00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
dme00981 (Undocumented) SBML MML
dme00982 (Undocumented) SBML MML
dme00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.