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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism fta: Francisella tularensis subsp. holarctica FTNF002-00

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
fta00010 Glycolysis / Gluconeogenesis SBML MML
fta00020 Citrate cycle (TCA cycle) SBML MML
fta00030 Pentose phosphate pathway SBML MML
fta00040 Pentose and glucuronate interconversions SBML MML
fta00051 Fructose and mannose metabolism SBML MML
fta00052 Galactose metabolism SBML MML
fta00061 Fatty acid biosynthesis SBML MML
fta00062 Fatty acid elongation in mitochondria SBML MML
fta00071 Fatty acid metabolism SBML MML
fta00100 (Undocumented) SBML MML
fta00120 (Undocumented) SBML MML
fta00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
fta00220 (Undocumented) SBML MML
fta00230 Purine metabolism SBML MML
fta00240 Pyrimidine metabolism SBML MML
fta00251 (Undocumented) SBML MML
fta00252 (Undocumented) SBML MML
fta00260 Glycine, serine and threonine metabolism SBML MML
fta00271 (Undocumented) SBML MML
fta00272 (Undocumented) SBML MML
fta00280 Valine, leucine and isoleucine degradation SBML MML
fta00281 Geraniol degradation SBML MML
fta00290 Valine, leucine and isoleucine biosynthesis SBML MML
fta00300 Lysine biosynthesis SBML MML
fta00310 Lysine degradation SBML MML
fta00311 Penicillin and cephalosporin biosynthesis SBML MML
fta00330 Arginine and proline metabolism SBML MML
fta00340 Histidine metabolism SBML MML
fta00350 Tyrosine metabolism SBML MML
fta00360 Phenylalanine metabolism SBML MML
fta00362 (Undocumented) SBML MML
fta00380 Tryptophan metabolism SBML MML
fta00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
fta00410 beta-Alanine metabolism SBML MML
fta00430 Taurine and hypotaurine metabolism SBML MML
fta00450 Selenoamino acid metabolism SBML MML
fta00460 (Undocumented) SBML MML
fta00471 D-Glutamine and D-glutamate metabolism SBML MML
fta00473 D-Alanine metabolism SBML MML
fta00480 Glutathione metabolism SBML MML
fta00500 Starch and sucrose metabolism SBML MML
fta00520 Amino sugar and nucleotide sugar metabolism SBML MML
fta00521 Streptomycin biosynthesis SBML MML
fta00523 Polyketide sugar unit biosynthesis SBML MML
fta00530 (Undocumented) SBML MML
fta00540 Lipopolysaccharide biosynthesis SBML MML
fta00550 Peptidoglycan biosynthesis SBML MML
fta00561 Glycerolipid metabolism SBML MML
fta00562 Inositol phosphate metabolism SBML MML
fta00564 Glycerophospholipid metabolism SBML MML
fta00590 Arachidonic acid metabolism SBML MML
fta00592 alpha-Linolenic acid metabolism SBML MML
fta00620 Pyruvate metabolism SBML MML
fta00624 1- and 2-Methylnaphthalene degradation SBML MML
fta00630 Glyoxylate and dicarboxylate metabolism SBML MML
fta00632 (Undocumented) SBML MML
fta00633 Trinitrotoluene degradation SBML MML
fta00640 Propanoate metabolism SBML MML
fta00641 3-Chloroacrylic acid degradation SBML MML
fta00642 Ethylbenzene degradation SBML MML
fta00650 Butanoate metabolism SBML MML
fta00670 One carbon pool by folate SBML MML
fta00680 Methane metabolism SBML MML
fta00710 (Undocumented) SBML MML
fta00720 (Undocumented) SBML MML
fta00730 Thiamine metabolism SBML MML
fta00740 Riboflavin metabolism SBML MML
fta00750 Vitamin B6 metabolism SBML MML
fta00760 Nicotinate and nicotinamide metabolism SBML MML
fta00770 Pantothenate and CoA biosynthesis SBML MML
fta00780 Biotin metabolism SBML MML
fta00785 Lipoic acid metabolism SBML MML
fta00790 Folate biosynthesis SBML MML
fta00791 Atrazine degradation SBML MML
fta00860 Porphyrin and chlorophyll metabolism SBML MML
fta00900 Terpenoid backbone biosynthesis SBML MML
fta00903 (Undocumented) SBML MML
fta00910 Nitrogen metabolism SBML MML
fta00960 (Undocumented) SBML MML
fta00970 Aminoacyl-tRNA biosynthesis SBML MML
fta00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.