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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism hau: Herpetosiphon aurantiacus

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
hau00010 Glycolysis / Gluconeogenesis SBML MML
hau00020 Citrate cycle (TCA cycle) SBML MML
hau00030 Pentose phosphate pathway SBML MML
hau00040 Pentose and glucuronate interconversions SBML MML
hau00051 Fructose and mannose metabolism SBML MML
hau00052 Galactose metabolism SBML MML
hau00053 Ascorbate and aldarate metabolism SBML MML
hau00061 Fatty acid biosynthesis SBML MML
hau00062 Fatty acid elongation in mitochondria SBML MML
hau00071 Fatty acid metabolism SBML MML
hau00072 Synthesis and degradation of ketone bodies SBML MML
hau00100 (Undocumented) SBML MML
hau00120 (Undocumented) SBML MML
hau00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
hau00220 (Undocumented) SBML MML
hau00230 Purine metabolism SBML MML
hau00240 Pyrimidine metabolism SBML MML
hau00251 (Undocumented) SBML MML
hau00252 (Undocumented) SBML MML
hau00260 Glycine, serine and threonine metabolism SBML MML
hau00271 (Undocumented) SBML MML
hau00272 (Undocumented) SBML MML
hau00280 Valine, leucine and isoleucine degradation SBML MML
hau00281 Geraniol degradation SBML MML
hau00290 Valine, leucine and isoleucine biosynthesis SBML MML
hau00300 Lysine biosynthesis SBML MML
hau00310 Lysine degradation SBML MML
hau00311 Penicillin and cephalosporin biosynthesis SBML MML
hau00330 Arginine and proline metabolism SBML MML
hau00340 Histidine metabolism SBML MML
hau00350 Tyrosine metabolism SBML MML
hau00360 Phenylalanine metabolism SBML MML
hau00361 gamma-Hexachlorocyclohexane degradation SBML MML
hau00362 (Undocumented) SBML MML
hau00364 Fluorobenzoate degradation SBML MML
hau00380 Tryptophan metabolism SBML MML
hau00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
hau00401 Novobiocin biosynthesis SBML MML
hau00410 beta-Alanine metabolism SBML MML
hau00430 Taurine and hypotaurine metabolism SBML MML
hau00450 Selenoamino acid metabolism SBML MML
hau00460 (Undocumented) SBML MML
hau00471 D-Glutamine and D-glutamate metabolism SBML MML
hau00473 D-Alanine metabolism SBML MML
hau00480 Glutathione metabolism SBML MML
hau00500 Starch and sucrose metabolism SBML MML
hau00510 (Undocumented) SBML MML
hau00520 Amino sugar and nucleotide sugar metabolism SBML MML
hau00521 Streptomycin biosynthesis SBML MML
hau00523 Polyketide sugar unit biosynthesis SBML MML
hau00530 (Undocumented) SBML MML
hau00540 Lipopolysaccharide biosynthesis SBML MML
hau00550 Peptidoglycan biosynthesis SBML MML
hau00561 Glycerolipid metabolism SBML MML
hau00562 Inositol phosphate metabolism SBML MML
hau00564 Glycerophospholipid metabolism SBML MML
hau00565 Ether lipid metabolism SBML MML
hau00592 alpha-Linolenic acid metabolism SBML MML
hau00600 Sphingolipid metabolism SBML MML
hau00620 Pyruvate metabolism SBML MML
hau00624 1- and 2-Methylnaphthalene degradation SBML MML
hau00626 Naphthalene and anthracene degradation SBML MML
hau00627 1,4-Dichlorobenzene degradation SBML MML
hau00630 Glyoxylate and dicarboxylate metabolism SBML MML
hau00632 (Undocumented) SBML MML
hau00640 Propanoate metabolism SBML MML
hau00641 3-Chloroacrylic acid degradation SBML MML
hau00642 Ethylbenzene degradation SBML MML
hau00643 Styrene degradation SBML MML
hau00650 Butanoate metabolism SBML MML
hau00660 C5-Branched dibasic acid metabolism SBML MML
hau00670 One carbon pool by folate SBML MML
hau00680 Methane metabolism SBML MML
hau00710 (Undocumented) SBML MML
hau00720 (Undocumented) SBML MML
hau00730 Thiamine metabolism SBML MML
hau00740 Riboflavin metabolism SBML MML
hau00750 Vitamin B6 metabolism SBML MML
hau00760 Nicotinate and nicotinamide metabolism SBML MML
hau00770 Pantothenate and CoA biosynthesis SBML MML
hau00780 Biotin metabolism SBML MML
hau00785 Lipoic acid metabolism SBML MML
hau00790 Folate biosynthesis SBML MML
hau00791 Atrazine degradation SBML MML
hau00860 Porphyrin and chlorophyll metabolism SBML MML
hau00900 Terpenoid backbone biosynthesis SBML MML
hau00903 (Undocumented) SBML MML
hau00906 Carotenoid biosynthesis SBML MML
hau00908 (Undocumented) SBML MML
hau00910 Nitrogen metabolism SBML MML
hau00920 Sulfur metabolism SBML MML
hau00930 Caprolactam degradation SBML MML
hau00940 (Undocumented) SBML MML
hau00941 (Undocumented) SBML MML
hau00960 (Undocumented) SBML MML
hau00970 Aminoacyl-tRNA biosynthesis SBML MML
hau00982 (Undocumented) SBML MML
hau00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.