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Kegg pathway models for JSim

Organism lre: Lactobacillus reuteri DSM 20016

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lre00010 Glycolysis / Gluconeogenesis SBML MML
lre00020 Citrate cycle (TCA cycle) SBML MML
lre00030 Pentose phosphate pathway SBML MML
lre00040 Pentose and glucuronate interconversions SBML MML
lre00051 Fructose and mannose metabolism SBML MML
lre00052 Galactose metabolism SBML MML
lre00061 Fatty acid biosynthesis SBML MML
lre00071 Fatty acid metabolism SBML MML
lre00072 Synthesis and degradation of ketone bodies SBML MML
lre00100 (Undocumented) SBML MML
lre00120 (Undocumented) SBML MML
lre00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lre00220 (Undocumented) SBML MML
lre00230 Purine metabolism SBML MML
lre00240 Pyrimidine metabolism SBML MML
lre00251 (Undocumented) SBML MML
lre00252 (Undocumented) SBML MML
lre00260 Glycine, serine and threonine metabolism SBML MML
lre00271 (Undocumented) SBML MML
lre00272 (Undocumented) SBML MML
lre00280 Valine, leucine and isoleucine degradation SBML MML
lre00290 Valine, leucine and isoleucine biosynthesis SBML MML
lre00300 Lysine biosynthesis SBML MML
lre00310 Lysine degradation SBML MML
lre00330 Arginine and proline metabolism SBML MML
lre00340 Histidine metabolism SBML MML
lre00350 Tyrosine metabolism SBML MML
lre00360 Phenylalanine metabolism SBML MML
lre00362 (Undocumented) SBML MML
lre00380 Tryptophan metabolism SBML MML
lre00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lre00401 Novobiocin biosynthesis SBML MML
lre00410 beta-Alanine metabolism SBML MML
lre00430 Taurine and hypotaurine metabolism SBML MML
lre00440 Phosphonate and phosphinate metabolism SBML MML
lre00450 Selenoamino acid metabolism SBML MML
lre00460 (Undocumented) SBML MML
lre00471 D-Glutamine and D-glutamate metabolism SBML MML
lre00473 D-Alanine metabolism SBML MML
lre00480 Glutathione metabolism SBML MML
lre00500 Starch and sucrose metabolism SBML MML
lre00520 Amino sugar and nucleotide sugar metabolism SBML MML
lre00521 Streptomycin biosynthesis SBML MML
lre00523 Polyketide sugar unit biosynthesis SBML MML
lre00530 (Undocumented) SBML MML
lre00550 Peptidoglycan biosynthesis SBML MML
lre00561 Glycerolipid metabolism SBML MML
lre00562 Inositol phosphate metabolism SBML MML
lre00564 Glycerophospholipid metabolism SBML MML
lre00600 Sphingolipid metabolism SBML MML
lre00620 Pyruvate metabolism SBML MML
lre00622 Toluene and xylene degradation SBML MML
lre00624 1- and 2-Methylnaphthalene degradation SBML MML
lre00628 Fluorene degradation SBML MML
lre00630 Glyoxylate and dicarboxylate metabolism SBML MML
lre00632 (Undocumented) SBML MML
lre00640 Propanoate metabolism SBML MML
lre00641 3-Chloroacrylic acid degradation SBML MML
lre00650 Butanoate metabolism SBML MML
lre00660 C5-Branched dibasic acid metabolism SBML MML
lre00670 One carbon pool by folate SBML MML
lre00680 Methane metabolism SBML MML
lre00710 (Undocumented) SBML MML
lre00720 (Undocumented) SBML MML
lre00730 Thiamine metabolism SBML MML
lre00740 Riboflavin metabolism SBML MML
lre00760 Nicotinate and nicotinamide metabolism SBML MML
lre00770 Pantothenate and CoA biosynthesis SBML MML
lre00790 Folate biosynthesis SBML MML
lre00860 Porphyrin and chlorophyll metabolism SBML MML
lre00900 Terpenoid backbone biosynthesis SBML MML
lre00910 Nitrogen metabolism SBML MML
lre00920 Sulfur metabolism SBML MML
lre00930 Caprolactam degradation SBML MML
lre00960 (Undocumented) SBML MML
lre00970 Aminoacyl-tRNA biosynthesis SBML MML
lre00982 (Undocumented) SBML MML
lre00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.