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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mka: Methanopyrus kandleri

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mka00010 Glycolysis / Gluconeogenesis SBML MML
mka00020 Citrate cycle (TCA cycle) SBML MML
mka00030 Pentose phosphate pathway SBML MML
mka00051 Fructose and mannose metabolism SBML MML
mka00052 Galactose metabolism SBML MML
mka00071 Fatty acid metabolism SBML MML
mka00100 (Undocumented) SBML MML
mka00120 (Undocumented) SBML MML
mka00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mka00220 (Undocumented) SBML MML
mka00230 Purine metabolism SBML MML
mka00240 Pyrimidine metabolism SBML MML
mka00251 (Undocumented) SBML MML
mka00252 (Undocumented) SBML MML
mka00260 Glycine, serine and threonine metabolism SBML MML
mka00271 (Undocumented) SBML MML
mka00272 (Undocumented) SBML MML
mka00280 Valine, leucine and isoleucine degradation SBML MML
mka00281 Geraniol degradation SBML MML
mka00290 Valine, leucine and isoleucine biosynthesis SBML MML
mka00300 Lysine biosynthesis SBML MML
mka00330 Arginine and proline metabolism SBML MML
mka00340 Histidine metabolism SBML MML
mka00350 Tyrosine metabolism SBML MML
mka00360 Phenylalanine metabolism SBML MML
mka00362 (Undocumented) SBML MML
mka00380 Tryptophan metabolism SBML MML
mka00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mka00401 Novobiocin biosynthesis SBML MML
mka00450 Selenoamino acid metabolism SBML MML
mka00460 (Undocumented) SBML MML
mka00500 Starch and sucrose metabolism SBML MML
mka00510 (Undocumented) SBML MML
mka00520 Amino sugar and nucleotide sugar metabolism SBML MML
mka00521 Streptomycin biosynthesis SBML MML
mka00530 (Undocumented) SBML MML
mka00550 Peptidoglycan biosynthesis SBML MML
mka00562 Inositol phosphate metabolism SBML MML
mka00564 Glycerophospholipid metabolism SBML MML
mka00592 alpha-Linolenic acid metabolism SBML MML
mka00620 Pyruvate metabolism SBML MML
mka00624 1- and 2-Methylnaphthalene degradation SBML MML
mka00625 (Undocumented) SBML MML
mka00630 Glyoxylate and dicarboxylate metabolism SBML MML
mka00632 (Undocumented) SBML MML
mka00640 Propanoate metabolism SBML MML
mka00650 Butanoate metabolism SBML MML
mka00660 C5-Branched dibasic acid metabolism SBML MML
mka00670 One carbon pool by folate SBML MML
mka00680 Methane metabolism SBML MML
mka00710 (Undocumented) SBML MML
mka00720 (Undocumented) SBML MML
mka00730 Thiamine metabolism SBML MML
mka00740 Riboflavin metabolism SBML MML
mka00750 Vitamin B6 metabolism SBML MML
mka00760 Nicotinate and nicotinamide metabolism SBML MML
mka00770 Pantothenate and CoA biosynthesis SBML MML
mka00790 Folate biosynthesis SBML MML
mka00860 Porphyrin and chlorophyll metabolism SBML MML
mka00900 Terpenoid backbone biosynthesis SBML MML
mka00910 Nitrogen metabolism SBML MML
mka00950 (Undocumented) SBML MML
mka00970 Aminoacyl-tRNA biosynthesis SBML MML
mka00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.