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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mle: Mycobacterium leprae TN

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mle00010 Glycolysis / Gluconeogenesis SBML MML
mle00020 Citrate cycle (TCA cycle) SBML MML
mle00030 Pentose phosphate pathway SBML MML
mle00040 Pentose and glucuronate interconversions SBML MML
mle00051 Fructose and mannose metabolism SBML MML
mle00052 Galactose metabolism SBML MML
mle00061 Fatty acid biosynthesis SBML MML
mle00062 Fatty acid elongation in mitochondria SBML MML
mle00071 Fatty acid metabolism SBML MML
mle00100 (Undocumented) SBML MML
mle00120 (Undocumented) SBML MML
mle00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mle00220 (Undocumented) SBML MML
mle00230 Purine metabolism SBML MML
mle00240 Pyrimidine metabolism SBML MML
mle00251 (Undocumented) SBML MML
mle00252 (Undocumented) SBML MML
mle00260 Glycine, serine and threonine metabolism SBML MML
mle00271 (Undocumented) SBML MML
mle00272 (Undocumented) SBML MML
mle00280 Valine, leucine and isoleucine degradation SBML MML
mle00281 Geraniol degradation SBML MML
mle00290 Valine, leucine and isoleucine biosynthesis SBML MML
mle00300 Lysine biosynthesis SBML MML
mle00310 Lysine degradation SBML MML
mle00330 Arginine and proline metabolism SBML MML
mle00340 Histidine metabolism SBML MML
mle00350 Tyrosine metabolism SBML MML
mle00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
mle00360 Phenylalanine metabolism SBML MML
mle00361 gamma-Hexachlorocyclohexane degradation SBML MML
mle00364 Fluorobenzoate degradation SBML MML
mle00380 Tryptophan metabolism SBML MML
mle00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mle00401 Novobiocin biosynthesis SBML MML
mle00410 beta-Alanine metabolism SBML MML
mle00450 Selenoamino acid metabolism SBML MML
mle00460 (Undocumented) SBML MML
mle00471 D-Glutamine and D-glutamate metabolism SBML MML
mle00473 D-Alanine metabolism SBML MML
mle00480 Glutathione metabolism SBML MML
mle00500 Starch and sucrose metabolism SBML MML
mle00510 (Undocumented) SBML MML
mle00520 Amino sugar and nucleotide sugar metabolism SBML MML
mle00521 Streptomycin biosynthesis SBML MML
mle00523 Polyketide sugar unit biosynthesis SBML MML
mle00530 (Undocumented) SBML MML
mle00550 Peptidoglycan biosynthesis SBML MML
mle00561 Glycerolipid metabolism SBML MML
mle00562 Inositol phosphate metabolism SBML MML
mle00564 Glycerophospholipid metabolism SBML MML
mle00592 alpha-Linolenic acid metabolism SBML MML
mle00620 Pyruvate metabolism SBML MML
mle00624 1- and 2-Methylnaphthalene degradation SBML MML
mle00626 Naphthalene and anthracene degradation SBML MML
mle00627 1,4-Dichlorobenzene degradation SBML MML
mle00630 Glyoxylate and dicarboxylate metabolism SBML MML
mle00632 (Undocumented) SBML MML
mle00640 Propanoate metabolism SBML MML
mle00641 3-Chloroacrylic acid degradation SBML MML
mle00642 Ethylbenzene degradation SBML MML
mle00643 Styrene degradation SBML MML
mle00650 Butanoate metabolism SBML MML
mle00660 C5-Branched dibasic acid metabolism SBML MML
mle00670 One carbon pool by folate SBML MML
mle00710 (Undocumented) SBML MML
mle00720 (Undocumented) SBML MML
mle00730 Thiamine metabolism SBML MML
mle00740 Riboflavin metabolism SBML MML
mle00750 Vitamin B6 metabolism SBML MML
mle00760 Nicotinate and nicotinamide metabolism SBML MML
mle00770 Pantothenate and CoA biosynthesis SBML MML
mle00780 Biotin metabolism SBML MML
mle00785 Lipoic acid metabolism SBML MML
mle00790 Folate biosynthesis SBML MML
mle00860 Porphyrin and chlorophyll metabolism SBML MML
mle00900 Terpenoid backbone biosynthesis SBML MML
mle00903 (Undocumented) SBML MML
mle00910 Nitrogen metabolism SBML MML
mle00920 Sulfur metabolism SBML MML
mle00930 Caprolactam degradation SBML MML
mle00940 (Undocumented) SBML MML
mle00960 (Undocumented) SBML MML
mle00970 Aminoacyl-tRNA biosynthesis SBML MML
mle00982 (Undocumented) SBML MML
mle00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.