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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ncr: Neurospora crassa

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ncr00010 Glycolysis / Gluconeogenesis SBML MML
ncr00020 Citrate cycle (TCA cycle) SBML MML
ncr00030 Pentose phosphate pathway SBML MML
ncr00031 (Undocumented) SBML MML
ncr00040 Pentose and glucuronate interconversions SBML MML
ncr00051 Fructose and mannose metabolism SBML MML
ncr00052 Galactose metabolism SBML MML
ncr00053 Ascorbate and aldarate metabolism SBML MML
ncr00061 Fatty acid biosynthesis SBML MML
ncr00062 Fatty acid elongation in mitochondria SBML MML
ncr00071 Fatty acid metabolism SBML MML
ncr00072 Synthesis and degradation of ketone bodies SBML MML
ncr00100 (Undocumented) SBML MML
ncr00120 (Undocumented) SBML MML
ncr00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ncr00150 Androgen and estrogen metabolism SBML MML
ncr00220 (Undocumented) SBML MML
ncr00230 Purine metabolism SBML MML
ncr00232 Caffeine metabolism SBML MML
ncr00240 Pyrimidine metabolism SBML MML
ncr00251 (Undocumented) SBML MML
ncr00252 (Undocumented) SBML MML
ncr00260 Glycine, serine and threonine metabolism SBML MML
ncr00271 (Undocumented) SBML MML
ncr00272 (Undocumented) SBML MML
ncr00280 Valine, leucine and isoleucine degradation SBML MML
ncr00281 Geraniol degradation SBML MML
ncr00290 Valine, leucine and isoleucine biosynthesis SBML MML
ncr00300 Lysine biosynthesis SBML MML
ncr00310 Lysine degradation SBML MML
ncr00330 Arginine and proline metabolism SBML MML
ncr00340 Histidine metabolism SBML MML
ncr00350 Tyrosine metabolism SBML MML
ncr00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
ncr00360 Phenylalanine metabolism SBML MML
ncr00361 gamma-Hexachlorocyclohexane degradation SBML MML
ncr00362 (Undocumented) SBML MML
ncr00363 Bisphenol A degradation SBML MML
ncr00364 Fluorobenzoate degradation SBML MML
ncr00380 Tryptophan metabolism SBML MML
ncr00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ncr00401 Novobiocin biosynthesis SBML MML
ncr00410 beta-Alanine metabolism SBML MML
ncr00430 Taurine and hypotaurine metabolism SBML MML
ncr00440 Phosphonate and phosphinate metabolism SBML MML
ncr00450 Selenoamino acid metabolism SBML MML
ncr00460 (Undocumented) SBML MML
ncr00472 D-Arginine and D-ornithine metabolism SBML MML
ncr00480 Glutathione metabolism SBML MML
ncr00500 Starch and sucrose metabolism SBML MML
ncr00510 (Undocumented) SBML MML
ncr00520 Amino sugar and nucleotide sugar metabolism SBML MML
ncr00521 Streptomycin biosynthesis SBML MML
ncr00530 (Undocumented) SBML MML
ncr00550 Peptidoglycan biosynthesis SBML MML
ncr00561 Glycerolipid metabolism SBML MML
ncr00562 Inositol phosphate metabolism SBML MML
ncr00564 Glycerophospholipid metabolism SBML MML
ncr00565 Ether lipid metabolism SBML MML
ncr00590 Arachidonic acid metabolism SBML MML
ncr00591 Linoleic acid metabolism SBML MML
ncr00592 alpha-Linolenic acid metabolism SBML MML
ncr00600 Sphingolipid metabolism SBML MML
ncr00620 Pyruvate metabolism SBML MML
ncr00622 Toluene and xylene degradation SBML MML
ncr00623 2,4-Dichlorobenzoate degradation SBML MML
ncr00624 1- and 2-Methylnaphthalene degradation SBML MML
ncr00625 (Undocumented) SBML MML
ncr00626 Naphthalene and anthracene degradation SBML MML
ncr00627 1,4-Dichlorobenzene degradation SBML MML
ncr00628 Fluorene degradation SBML MML
ncr00630 Glyoxylate and dicarboxylate metabolism SBML MML
ncr00631 1,2-Dichloroethane degradation SBML MML
ncr00632 (Undocumented) SBML MML
ncr00633 Trinitrotoluene degradation SBML MML
ncr00640 Propanoate metabolism SBML MML
ncr00641 3-Chloroacrylic acid degradation SBML MML
ncr00642 Ethylbenzene degradation SBML MML
ncr00643 Styrene degradation SBML MML
ncr00650 Butanoate metabolism SBML MML
ncr00660 C5-Branched dibasic acid metabolism SBML MML
ncr00670 One carbon pool by folate SBML MML
ncr00680 Methane metabolism SBML MML
ncr00710 (Undocumented) SBML MML
ncr00720 (Undocumented) SBML MML
ncr00730 Thiamine metabolism SBML MML
ncr00740 Riboflavin metabolism SBML MML
ncr00750 Vitamin B6 metabolism SBML MML
ncr00760 Nicotinate and nicotinamide metabolism SBML MML
ncr00770 Pantothenate and CoA biosynthesis SBML MML
ncr00780 Biotin metabolism SBML MML
ncr00790 Folate biosynthesis SBML MML
ncr00791 Atrazine degradation SBML MML
ncr00860 Porphyrin and chlorophyll metabolism SBML MML
ncr00900 Terpenoid backbone biosynthesis SBML MML
ncr00903 (Undocumented) SBML MML
ncr00910 Nitrogen metabolism SBML MML
ncr00920 Sulfur metabolism SBML MML
ncr00930 Caprolactam degradation SBML MML
ncr00940 (Undocumented) SBML MML
ncr00941 (Undocumented) SBML MML
ncr00950 (Undocumented) SBML MML
ncr00960 (Undocumented) SBML MML
ncr00970 Aminoacyl-tRNA biosynthesis SBML MML
ncr00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
ncr00982 (Undocumented) SBML MML
ncr00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.