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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism nmu: Nitrosospira multiformis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
nmu00010 Glycolysis / Gluconeogenesis SBML MML
nmu00020 Citrate cycle (TCA cycle) SBML MML
nmu00030 Pentose phosphate pathway SBML MML
nmu00040 Pentose and glucuronate interconversions SBML MML
nmu00051 Fructose and mannose metabolism SBML MML
nmu00052 Galactose metabolism SBML MML
nmu00053 Ascorbate and aldarate metabolism SBML MML
nmu00061 Fatty acid biosynthesis SBML MML
nmu00062 Fatty acid elongation in mitochondria SBML MML
nmu00071 Fatty acid metabolism SBML MML
nmu00100 (Undocumented) SBML MML
nmu00120 (Undocumented) SBML MML
nmu00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
nmu00220 (Undocumented) SBML MML
nmu00230 Purine metabolism SBML MML
nmu00240 Pyrimidine metabolism SBML MML
nmu00251 (Undocumented) SBML MML
nmu00252 (Undocumented) SBML MML
nmu00260 Glycine, serine and threonine metabolism SBML MML
nmu00271 (Undocumented) SBML MML
nmu00272 (Undocumented) SBML MML
nmu00280 Valine, leucine and isoleucine degradation SBML MML
nmu00281 Geraniol degradation SBML MML
nmu00290 Valine, leucine and isoleucine biosynthesis SBML MML
nmu00300 Lysine biosynthesis SBML MML
nmu00310 Lysine degradation SBML MML
nmu00330 Arginine and proline metabolism SBML MML
nmu00340 Histidine metabolism SBML MML
nmu00350 Tyrosine metabolism SBML MML
nmu00360 Phenylalanine metabolism SBML MML
nmu00362 (Undocumented) SBML MML
nmu00380 Tryptophan metabolism SBML MML
nmu00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
nmu00401 Novobiocin biosynthesis SBML MML
nmu00410 beta-Alanine metabolism SBML MML
nmu00430 Taurine and hypotaurine metabolism SBML MML
nmu00450 Selenoamino acid metabolism SBML MML
nmu00460 (Undocumented) SBML MML
nmu00471 D-Glutamine and D-glutamate metabolism SBML MML
nmu00472 D-Arginine and D-ornithine metabolism SBML MML
nmu00473 D-Alanine metabolism SBML MML
nmu00480 Glutathione metabolism SBML MML
nmu00500 Starch and sucrose metabolism SBML MML
nmu00520 Amino sugar and nucleotide sugar metabolism SBML MML
nmu00521 Streptomycin biosynthesis SBML MML
nmu00523 Polyketide sugar unit biosynthesis SBML MML
nmu00530 (Undocumented) SBML MML
nmu00540 Lipopolysaccharide biosynthesis SBML MML
nmu00550 Peptidoglycan biosynthesis SBML MML
nmu00561 Glycerolipid metabolism SBML MML
nmu00562 Inositol phosphate metabolism SBML MML
nmu00564 Glycerophospholipid metabolism SBML MML
nmu00592 alpha-Linolenic acid metabolism SBML MML
nmu00620 Pyruvate metabolism SBML MML
nmu00622 Toluene and xylene degradation SBML MML
nmu00624 1- and 2-Methylnaphthalene degradation SBML MML
nmu00630 Glyoxylate and dicarboxylate metabolism SBML MML
nmu00632 (Undocumented) SBML MML
nmu00640 Propanoate metabolism SBML MML
nmu00641 3-Chloroacrylic acid degradation SBML MML
nmu00650 Butanoate metabolism SBML MML
nmu00660 C5-Branched dibasic acid metabolism SBML MML
nmu00670 One carbon pool by folate SBML MML
nmu00680 Methane metabolism SBML MML
nmu00710 (Undocumented) SBML MML
nmu00720 (Undocumented) SBML MML
nmu00730 Thiamine metabolism SBML MML
nmu00740 Riboflavin metabolism SBML MML
nmu00750 Vitamin B6 metabolism SBML MML
nmu00760 Nicotinate and nicotinamide metabolism SBML MML
nmu00770 Pantothenate and CoA biosynthesis SBML MML
nmu00780 Biotin metabolism SBML MML
nmu00785 Lipoic acid metabolism SBML MML
nmu00790 Folate biosynthesis SBML MML
nmu00860 Porphyrin and chlorophyll metabolism SBML MML
nmu00900 Terpenoid backbone biosynthesis SBML MML
nmu00903 (Undocumented) SBML MML
nmu00910 Nitrogen metabolism SBML MML
nmu00920 Sulfur metabolism SBML MML
nmu00930 Caprolactam degradation SBML MML
nmu00940 (Undocumented) SBML MML
nmu00941 (Undocumented) SBML MML
nmu00950 (Undocumented) SBML MML
nmu00960 (Undocumented) SBML MML
nmu00970 Aminoacyl-tRNA biosynthesis SBML MML
nmu00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
nmu00982 (Undocumented) SBML MML
nmu00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.