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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism pcr: Psychrobacter cryohalolentis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
pcr00010 Glycolysis / Gluconeogenesis SBML MML
pcr00020 Citrate cycle (TCA cycle) SBML MML
pcr00030 Pentose phosphate pathway SBML MML
pcr00031 (Undocumented) SBML MML
pcr00040 Pentose and glucuronate interconversions SBML MML
pcr00051 Fructose and mannose metabolism SBML MML
pcr00052 Galactose metabolism SBML MML
pcr00053 Ascorbate and aldarate metabolism SBML MML
pcr00061 Fatty acid biosynthesis SBML MML
pcr00062 Fatty acid elongation in mitochondria SBML MML
pcr00071 Fatty acid metabolism SBML MML
pcr00072 Synthesis and degradation of ketone bodies SBML MML
pcr00100 (Undocumented) SBML MML
pcr00120 (Undocumented) SBML MML
pcr00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
pcr00220 (Undocumented) SBML MML
pcr00230 Purine metabolism SBML MML
pcr00240 Pyrimidine metabolism SBML MML
pcr00251 (Undocumented) SBML MML
pcr00252 (Undocumented) SBML MML
pcr00260 Glycine, serine and threonine metabolism SBML MML
pcr00271 (Undocumented) SBML MML
pcr00272 (Undocumented) SBML MML
pcr00280 Valine, leucine and isoleucine degradation SBML MML
pcr00281 Geraniol degradation SBML MML
pcr00290 Valine, leucine and isoleucine biosynthesis SBML MML
pcr00300 Lysine biosynthesis SBML MML
pcr00310 Lysine degradation SBML MML
pcr00330 Arginine and proline metabolism SBML MML
pcr00340 Histidine metabolism SBML MML
pcr00350 Tyrosine metabolism SBML MML
pcr00360 Phenylalanine metabolism SBML MML
pcr00361 gamma-Hexachlorocyclohexane degradation SBML MML
pcr00362 (Undocumented) SBML MML
pcr00364 Fluorobenzoate degradation SBML MML
pcr00380 Tryptophan metabolism SBML MML
pcr00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
pcr00401 Novobiocin biosynthesis SBML MML
pcr00410 beta-Alanine metabolism SBML MML
pcr00430 Taurine and hypotaurine metabolism SBML MML
pcr00450 Selenoamino acid metabolism SBML MML
pcr00460 (Undocumented) SBML MML
pcr00471 D-Glutamine and D-glutamate metabolism SBML MML
pcr00473 D-Alanine metabolism SBML MML
pcr00480 Glutathione metabolism SBML MML
pcr00500 Starch and sucrose metabolism SBML MML
pcr00520 Amino sugar and nucleotide sugar metabolism SBML MML
pcr00521 Streptomycin biosynthesis SBML MML
pcr00523 Polyketide sugar unit biosynthesis SBML MML
pcr00530 (Undocumented) SBML MML
pcr00540 Lipopolysaccharide biosynthesis SBML MML
pcr00550 Peptidoglycan biosynthesis SBML MML
pcr00561 Glycerolipid metabolism SBML MML
pcr00562 Inositol phosphate metabolism SBML MML
pcr00564 Glycerophospholipid metabolism SBML MML
pcr00590 Arachidonic acid metabolism SBML MML
pcr00592 alpha-Linolenic acid metabolism SBML MML
pcr00620 Pyruvate metabolism SBML MML
pcr00622 Toluene and xylene degradation SBML MML
pcr00624 1- and 2-Methylnaphthalene degradation SBML MML
pcr00626 Naphthalene and anthracene degradation SBML MML
pcr00627 1,4-Dichlorobenzene degradation SBML MML
pcr00630 Glyoxylate and dicarboxylate metabolism SBML MML
pcr00631 1,2-Dichloroethane degradation SBML MML
pcr00632 (Undocumented) SBML MML
pcr00633 Trinitrotoluene degradation SBML MML
pcr00640 Propanoate metabolism SBML MML
pcr00641 3-Chloroacrylic acid degradation SBML MML
pcr00643 Styrene degradation SBML MML
pcr00650 Butanoate metabolism SBML MML
pcr00660 C5-Branched dibasic acid metabolism SBML MML
pcr00670 One carbon pool by folate SBML MML
pcr00680 Methane metabolism SBML MML
pcr00710 (Undocumented) SBML MML
pcr00720 (Undocumented) SBML MML
pcr00730 Thiamine metabolism SBML MML
pcr00740 Riboflavin metabolism SBML MML
pcr00750 Vitamin B6 metabolism SBML MML
pcr00760 Nicotinate and nicotinamide metabolism SBML MML
pcr00770 Pantothenate and CoA biosynthesis SBML MML
pcr00780 Biotin metabolism SBML MML
pcr00785 Lipoic acid metabolism SBML MML
pcr00790 Folate biosynthesis SBML MML
pcr00791 Atrazine degradation SBML MML
pcr00860 Porphyrin and chlorophyll metabolism SBML MML
pcr00900 Terpenoid backbone biosynthesis SBML MML
pcr00903 (Undocumented) SBML MML
pcr00910 Nitrogen metabolism SBML MML
pcr00920 Sulfur metabolism SBML MML
pcr00930 Caprolactam degradation SBML MML
pcr00940 (Undocumented) SBML MML
pcr00950 (Undocumented) SBML MML
pcr00970 Aminoacyl-tRNA biosynthesis SBML MML
pcr00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
pcr00982 (Undocumented) SBML MML
pcr00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.