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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism sat: Syntrophus aciditrophicus

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
sat00010 Glycolysis / Gluconeogenesis SBML MML
sat00020 Citrate cycle (TCA cycle) SBML MML
sat00030 Pentose phosphate pathway SBML MML
sat00040 Pentose and glucuronate interconversions SBML MML
sat00051 Fructose and mannose metabolism SBML MML
sat00052 Galactose metabolism SBML MML
sat00053 Ascorbate and aldarate metabolism SBML MML
sat00061 Fatty acid biosynthesis SBML MML
sat00071 Fatty acid metabolism SBML MML
sat00100 (Undocumented) SBML MML
sat00120 (Undocumented) SBML MML
sat00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
sat00220 (Undocumented) SBML MML
sat00230 Purine metabolism SBML MML
sat00240 Pyrimidine metabolism SBML MML
sat00251 (Undocumented) SBML MML
sat00252 (Undocumented) SBML MML
sat00260 Glycine, serine and threonine metabolism SBML MML
sat00271 (Undocumented) SBML MML
sat00272 (Undocumented) SBML MML
sat00280 Valine, leucine and isoleucine degradation SBML MML
sat00281 Geraniol degradation SBML MML
sat00290 Valine, leucine and isoleucine biosynthesis SBML MML
sat00300 Lysine biosynthesis SBML MML
sat00310 Lysine degradation SBML MML
sat00330 Arginine and proline metabolism SBML MML
sat00340 Histidine metabolism SBML MML
sat00350 Tyrosine metabolism SBML MML
sat00360 Phenylalanine metabolism SBML MML
sat00361 gamma-Hexachlorocyclohexane degradation SBML MML
sat00362 (Undocumented) SBML MML
sat00364 Fluorobenzoate degradation SBML MML
sat00380 Tryptophan metabolism SBML MML
sat00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
sat00401 Novobiocin biosynthesis SBML MML
sat00410 beta-Alanine metabolism SBML MML
sat00430 Taurine and hypotaurine metabolism SBML MML
sat00440 Phosphonate and phosphinate metabolism SBML MML
sat00450 Selenoamino acid metabolism SBML MML
sat00460 (Undocumented) SBML MML
sat00471 D-Glutamine and D-glutamate metabolism SBML MML
sat00473 D-Alanine metabolism SBML MML
sat00500 Starch and sucrose metabolism SBML MML
sat00510 (Undocumented) SBML MML
sat00520 Amino sugar and nucleotide sugar metabolism SBML MML
sat00521 Streptomycin biosynthesis SBML MML
sat00523 Polyketide sugar unit biosynthesis SBML MML
sat00530 (Undocumented) SBML MML
sat00540 Lipopolysaccharide biosynthesis SBML MML
sat00550 Peptidoglycan biosynthesis SBML MML
sat00561 Glycerolipid metabolism SBML MML
sat00562 Inositol phosphate metabolism SBML MML
sat00564 Glycerophospholipid metabolism SBML MML
sat00592 alpha-Linolenic acid metabolism SBML MML
sat00620 Pyruvate metabolism SBML MML
sat00624 1- and 2-Methylnaphthalene degradation SBML MML
sat00627 1,4-Dichlorobenzene degradation SBML MML
sat00630 Glyoxylate and dicarboxylate metabolism SBML MML
sat00632 (Undocumented) SBML MML
sat00640 Propanoate metabolism SBML MML
sat00641 3-Chloroacrylic acid degradation SBML MML
sat00642 Ethylbenzene degradation SBML MML
sat00650 Butanoate metabolism SBML MML
sat00660 C5-Branched dibasic acid metabolism SBML MML
sat00670 One carbon pool by folate SBML MML
sat00680 Methane metabolism SBML MML
sat00710 (Undocumented) SBML MML
sat00720 (Undocumented) SBML MML
sat00730 Thiamine metabolism SBML MML
sat00740 Riboflavin metabolism SBML MML
sat00750 Vitamin B6 metabolism SBML MML
sat00760 Nicotinate and nicotinamide metabolism SBML MML
sat00770 Pantothenate and CoA biosynthesis SBML MML
sat00780 Biotin metabolism SBML MML
sat00790 Folate biosynthesis SBML MML
sat00791 Atrazine degradation SBML MML
sat00860 Porphyrin and chlorophyll metabolism SBML MML
sat00900 Terpenoid backbone biosynthesis SBML MML
sat00903 (Undocumented) SBML MML
sat00910 Nitrogen metabolism SBML MML
sat00920 Sulfur metabolism SBML MML
sat00930 Caprolactam degradation SBML MML
sat00960 (Undocumented) SBML MML
sat00970 Aminoacyl-tRNA biosynthesis SBML MML
sat00982 (Undocumented) SBML MML
sat00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.