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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ses: Salmonella enterica subsp. arizonae

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ses00010 Glycolysis / Gluconeogenesis SBML MML
ses00020 Citrate cycle (TCA cycle) SBML MML
ses00030 Pentose phosphate pathway SBML MML
ses00040 Pentose and glucuronate interconversions SBML MML
ses00051 Fructose and mannose metabolism SBML MML
ses00052 Galactose metabolism SBML MML
ses00053 Ascorbate and aldarate metabolism SBML MML
ses00061 Fatty acid biosynthesis SBML MML
ses00071 Fatty acid metabolism SBML MML
ses00100 (Undocumented) SBML MML
ses00120 (Undocumented) SBML MML
ses00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ses00150 Androgen and estrogen metabolism SBML MML
ses00220 (Undocumented) SBML MML
ses00230 Purine metabolism SBML MML
ses00240 Pyrimidine metabolism SBML MML
ses00251 (Undocumented) SBML MML
ses00252 (Undocumented) SBML MML
ses00260 Glycine, serine and threonine metabolism SBML MML
ses00271 (Undocumented) SBML MML
ses00272 (Undocumented) SBML MML
ses00280 Valine, leucine and isoleucine degradation SBML MML
ses00281 Geraniol degradation SBML MML
ses00290 Valine, leucine and isoleucine biosynthesis SBML MML
ses00300 Lysine biosynthesis SBML MML
ses00310 Lysine degradation SBML MML
ses00330 Arginine and proline metabolism SBML MML
ses00340 Histidine metabolism SBML MML
ses00350 Tyrosine metabolism SBML MML
ses00360 Phenylalanine metabolism SBML MML
ses00361 gamma-Hexachlorocyclohexane degradation SBML MML
ses00362 (Undocumented) SBML MML
ses00364 Fluorobenzoate degradation SBML MML
ses00380 Tryptophan metabolism SBML MML
ses00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ses00401 Novobiocin biosynthesis SBML MML
ses00410 beta-Alanine metabolism SBML MML
ses00430 Taurine and hypotaurine metabolism SBML MML
ses00450 Selenoamino acid metabolism SBML MML
ses00460 (Undocumented) SBML MML
ses00471 D-Glutamine and D-glutamate metabolism SBML MML
ses00473 D-Alanine metabolism SBML MML
ses00480 Glutathione metabolism SBML MML
ses00500 Starch and sucrose metabolism SBML MML
ses00520 Amino sugar and nucleotide sugar metabolism SBML MML
ses00521 Streptomycin biosynthesis SBML MML
ses00523 Polyketide sugar unit biosynthesis SBML MML
ses00530 (Undocumented) SBML MML
ses00540 Lipopolysaccharide biosynthesis SBML MML
ses00550 Peptidoglycan biosynthesis SBML MML
ses00561 Glycerolipid metabolism SBML MML
ses00562 Inositol phosphate metabolism SBML MML
ses00564 Glycerophospholipid metabolism SBML MML
ses00590 Arachidonic acid metabolism SBML MML
ses00592 alpha-Linolenic acid metabolism SBML MML
ses00600 Sphingolipid metabolism SBML MML
ses00620 Pyruvate metabolism SBML MML
ses00624 1- and 2-Methylnaphthalene degradation SBML MML
ses00627 1,4-Dichlorobenzene degradation SBML MML
ses00630 Glyoxylate and dicarboxylate metabolism SBML MML
ses00632 (Undocumented) SBML MML
ses00633 Trinitrotoluene degradation SBML MML
ses00640 Propanoate metabolism SBML MML
ses00641 3-Chloroacrylic acid degradation SBML MML
ses00642 Ethylbenzene degradation SBML MML
ses00650 Butanoate metabolism SBML MML
ses00660 C5-Branched dibasic acid metabolism SBML MML
ses00670 One carbon pool by folate SBML MML
ses00680 Methane metabolism SBML MML
ses00710 (Undocumented) SBML MML
ses00720 (Undocumented) SBML MML
ses00730 Thiamine metabolism SBML MML
ses00740 Riboflavin metabolism SBML MML
ses00750 Vitamin B6 metabolism SBML MML
ses00760 Nicotinate and nicotinamide metabolism SBML MML
ses00770 Pantothenate and CoA biosynthesis SBML MML
ses00780 Biotin metabolism SBML MML
ses00790 Folate biosynthesis SBML MML
ses00791 Atrazine degradation SBML MML
ses00860 Porphyrin and chlorophyll metabolism SBML MML
ses00900 Terpenoid backbone biosynthesis SBML MML
ses00903 (Undocumented) SBML MML
ses00910 Nitrogen metabolism SBML MML
ses00920 Sulfur metabolism SBML MML
ses00950 (Undocumented) SBML MML
ses00960 (Undocumented) SBML MML
ses00970 Aminoacyl-tRNA biosynthesis SBML MML
ses00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
ses00982 (Undocumented) SBML MML
ses00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.