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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism sgl: Sodalis glossinidius

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
sgl00010 Glycolysis / Gluconeogenesis SBML MML
sgl00020 Citrate cycle (TCA cycle) SBML MML
sgl00030 Pentose phosphate pathway SBML MML
sgl00040 Pentose and glucuronate interconversions SBML MML
sgl00051 Fructose and mannose metabolism SBML MML
sgl00052 Galactose metabolism SBML MML
sgl00053 Ascorbate and aldarate metabolism SBML MML
sgl00061 Fatty acid biosynthesis SBML MML
sgl00100 (Undocumented) SBML MML
sgl00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
sgl00220 (Undocumented) SBML MML
sgl00230 Purine metabolism SBML MML
sgl00240 Pyrimidine metabolism SBML MML
sgl00251 (Undocumented) SBML MML
sgl00252 (Undocumented) SBML MML
sgl00260 Glycine, serine and threonine metabolism SBML MML
sgl00271 (Undocumented) SBML MML
sgl00272 (Undocumented) SBML MML
sgl00280 Valine, leucine and isoleucine degradation SBML MML
sgl00290 Valine, leucine and isoleucine biosynthesis SBML MML
sgl00300 Lysine biosynthesis SBML MML
sgl00310 Lysine degradation SBML MML
sgl00330 Arginine and proline metabolism SBML MML
sgl00340 Histidine metabolism SBML MML
sgl00350 Tyrosine metabolism SBML MML
sgl00360 Phenylalanine metabolism SBML MML
sgl00380 Tryptophan metabolism SBML MML
sgl00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
sgl00401 Novobiocin biosynthesis SBML MML
sgl00410 beta-Alanine metabolism SBML MML
sgl00430 Taurine and hypotaurine metabolism SBML MML
sgl00450 Selenoamino acid metabolism SBML MML
sgl00471 D-Glutamine and D-glutamate metabolism SBML MML
sgl00473 D-Alanine metabolism SBML MML
sgl00480 Glutathione metabolism SBML MML
sgl00500 Starch and sucrose metabolism SBML MML
sgl00520 Amino sugar and nucleotide sugar metabolism SBML MML
sgl00521 Streptomycin biosynthesis SBML MML
sgl00523 Polyketide sugar unit biosynthesis SBML MML
sgl00530 (Undocumented) SBML MML
sgl00540 Lipopolysaccharide biosynthesis SBML MML
sgl00550 Peptidoglycan biosynthesis SBML MML
sgl00561 Glycerolipid metabolism SBML MML
sgl00562 Inositol phosphate metabolism SBML MML
sgl00564 Glycerophospholipid metabolism SBML MML
sgl00620 Pyruvate metabolism SBML MML
sgl00624 1- and 2-Methylnaphthalene degradation SBML MML
sgl00626 Naphthalene and anthracene degradation SBML MML
sgl00630 Glyoxylate and dicarboxylate metabolism SBML MML
sgl00632 (Undocumented) SBML MML
sgl00640 Propanoate metabolism SBML MML
sgl00641 3-Chloroacrylic acid degradation SBML MML
sgl00650 Butanoate metabolism SBML MML
sgl00660 C5-Branched dibasic acid metabolism SBML MML
sgl00670 One carbon pool by folate SBML MML
sgl00680 Methane metabolism SBML MML
sgl00710 (Undocumented) SBML MML
sgl00720 (Undocumented) SBML MML
sgl00730 Thiamine metabolism SBML MML
sgl00740 Riboflavin metabolism SBML MML
sgl00750 Vitamin B6 metabolism SBML MML
sgl00760 Nicotinate and nicotinamide metabolism SBML MML
sgl00770 Pantothenate and CoA biosynthesis SBML MML
sgl00780 Biotin metabolism SBML MML
sgl00785 Lipoic acid metabolism SBML MML
sgl00790 Folate biosynthesis SBML MML
sgl00791 Atrazine degradation SBML MML
sgl00860 Porphyrin and chlorophyll metabolism SBML MML
sgl00900 Terpenoid backbone biosynthesis SBML MML
sgl00910 Nitrogen metabolism SBML MML
sgl00920 Sulfur metabolism SBML MML
sgl00941 (Undocumented) SBML MML
sgl00950 (Undocumented) SBML MML
sgl00970 Aminoacyl-tRNA biosynthesis SBML MML
sgl00982 (Undocumented) SBML MML
sgl00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.