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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism sgo: Streptococcus gordonii

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
sgo00010 Glycolysis / Gluconeogenesis SBML MML
sgo00020 Citrate cycle (TCA cycle) SBML MML
sgo00030 Pentose phosphate pathway SBML MML
sgo00040 Pentose and glucuronate interconversions SBML MML
sgo00051 Fructose and mannose metabolism SBML MML
sgo00052 Galactose metabolism SBML MML
sgo00061 Fatty acid biosynthesis SBML MML
sgo00071 Fatty acid metabolism SBML MML
sgo00100 (Undocumented) SBML MML
sgo00220 (Undocumented) SBML MML
sgo00230 Purine metabolism SBML MML
sgo00240 Pyrimidine metabolism SBML MML
sgo00251 (Undocumented) SBML MML
sgo00252 (Undocumented) SBML MML
sgo00260 Glycine, serine and threonine metabolism SBML MML
sgo00271 (Undocumented) SBML MML
sgo00272 (Undocumented) SBML MML
sgo00280 Valine, leucine and isoleucine degradation SBML MML
sgo00290 Valine, leucine and isoleucine biosynthesis SBML MML
sgo00300 Lysine biosynthesis SBML MML
sgo00330 Arginine and proline metabolism SBML MML
sgo00340 Histidine metabolism SBML MML
sgo00350 Tyrosine metabolism SBML MML
sgo00360 Phenylalanine metabolism SBML MML
sgo00361 gamma-Hexachlorocyclohexane degradation SBML MML
sgo00380 Tryptophan metabolism SBML MML
sgo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
sgo00401 Novobiocin biosynthesis SBML MML
sgo00430 Taurine and hypotaurine metabolism SBML MML
sgo00450 Selenoamino acid metabolism SBML MML
sgo00460 (Undocumented) SBML MML
sgo00471 D-Glutamine and D-glutamate metabolism SBML MML
sgo00473 D-Alanine metabolism SBML MML
sgo00480 Glutathione metabolism SBML MML
sgo00500 Starch and sucrose metabolism SBML MML
sgo00520 Amino sugar and nucleotide sugar metabolism SBML MML
sgo00521 Streptomycin biosynthesis SBML MML
sgo00523 Polyketide sugar unit biosynthesis SBML MML
sgo00530 (Undocumented) SBML MML
sgo00550 Peptidoglycan biosynthesis SBML MML
sgo00561 Glycerolipid metabolism SBML MML
sgo00562 Inositol phosphate metabolism SBML MML
sgo00564 Glycerophospholipid metabolism SBML MML
sgo00565 Ether lipid metabolism SBML MML
sgo00590 Arachidonic acid metabolism SBML MML
sgo00620 Pyruvate metabolism SBML MML
sgo00624 1- and 2-Methylnaphthalene degradation SBML MML
sgo00630 Glyoxylate and dicarboxylate metabolism SBML MML
sgo00632 (Undocumented) SBML MML
sgo00640 Propanoate metabolism SBML MML
sgo00641 3-Chloroacrylic acid degradation SBML MML
sgo00650 Butanoate metabolism SBML MML
sgo00660 C5-Branched dibasic acid metabolism SBML MML
sgo00670 One carbon pool by folate SBML MML
sgo00680 Methane metabolism SBML MML
sgo00710 (Undocumented) SBML MML
sgo00720 (Undocumented) SBML MML
sgo00730 Thiamine metabolism SBML MML
sgo00740 Riboflavin metabolism SBML MML
sgo00750 Vitamin B6 metabolism SBML MML
sgo00760 Nicotinate and nicotinamide metabolism SBML MML
sgo00770 Pantothenate and CoA biosynthesis SBML MML
sgo00780 Biotin metabolism SBML MML
sgo00785 Lipoic acid metabolism SBML MML
sgo00790 Folate biosynthesis SBML MML
sgo00860 Porphyrin and chlorophyll metabolism SBML MML
sgo00900 Terpenoid backbone biosynthesis SBML MML
sgo00903 (Undocumented) SBML MML
sgo00910 Nitrogen metabolism SBML MML
sgo00920 Sulfur metabolism SBML MML
sgo00930 Caprolactam degradation SBML MML
sgo00970 Aminoacyl-tRNA biosynthesis SBML MML
sgo00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
sgo00982 (Undocumented) SBML MML
sgo00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.