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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism sps: Streptococcus pyogenes SSI-1 (serotype M3)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
sps00010 Glycolysis / Gluconeogenesis SBML MML
sps00020 Citrate cycle (TCA cycle) SBML MML
sps00030 Pentose phosphate pathway SBML MML
sps00040 Pentose and glucuronate interconversions SBML MML
sps00051 Fructose and mannose metabolism SBML MML
sps00052 Galactose metabolism SBML MML
sps00053 Ascorbate and aldarate metabolism SBML MML
sps00061 Fatty acid biosynthesis SBML MML
sps00071 Fatty acid metabolism SBML MML
sps00072 Synthesis and degradation of ketone bodies SBML MML
sps00100 (Undocumented) SBML MML
sps00220 (Undocumented) SBML MML
sps00230 Purine metabolism SBML MML
sps00240 Pyrimidine metabolism SBML MML
sps00251 (Undocumented) SBML MML
sps00252 (Undocumented) SBML MML
sps00260 Glycine, serine and threonine metabolism SBML MML
sps00271 (Undocumented) SBML MML
sps00272 (Undocumented) SBML MML
sps00280 Valine, leucine and isoleucine degradation SBML MML
sps00290 Valine, leucine and isoleucine biosynthesis SBML MML
sps00300 Lysine biosynthesis SBML MML
sps00310 Lysine degradation SBML MML
sps00330 Arginine and proline metabolism SBML MML
sps00340 Histidine metabolism SBML MML
sps00350 Tyrosine metabolism SBML MML
sps00360 Phenylalanine metabolism SBML MML
sps00380 Tryptophan metabolism SBML MML
sps00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
sps00430 Taurine and hypotaurine metabolism SBML MML
sps00450 Selenoamino acid metabolism SBML MML
sps00460 (Undocumented) SBML MML
sps00471 D-Glutamine and D-glutamate metabolism SBML MML
sps00473 D-Alanine metabolism SBML MML
sps00480 Glutathione metabolism SBML MML
sps00500 Starch and sucrose metabolism SBML MML
sps00520 Amino sugar and nucleotide sugar metabolism SBML MML
sps00521 Streptomycin biosynthesis SBML MML
sps00523 Polyketide sugar unit biosynthesis SBML MML
sps00530 (Undocumented) SBML MML
sps00550 Peptidoglycan biosynthesis SBML MML
sps00561 Glycerolipid metabolism SBML MML
sps00562 Inositol phosphate metabolism SBML MML
sps00564 Glycerophospholipid metabolism SBML MML
sps00590 Arachidonic acid metabolism SBML MML
sps00620 Pyruvate metabolism SBML MML
sps00624 1- and 2-Methylnaphthalene degradation SBML MML
sps00630 Glyoxylate and dicarboxylate metabolism SBML MML
sps00632 (Undocumented) SBML MML
sps00640 Propanoate metabolism SBML MML
sps00641 3-Chloroacrylic acid degradation SBML MML
sps00643 Styrene degradation SBML MML
sps00650 Butanoate metabolism SBML MML
sps00670 One carbon pool by folate SBML MML
sps00680 Methane metabolism SBML MML
sps00710 (Undocumented) SBML MML
sps00730 Thiamine metabolism SBML MML
sps00740 Riboflavin metabolism SBML MML
sps00750 Vitamin B6 metabolism SBML MML
sps00760 Nicotinate and nicotinamide metabolism SBML MML
sps00770 Pantothenate and CoA biosynthesis SBML MML
sps00780 Biotin metabolism SBML MML
sps00785 Lipoic acid metabolism SBML MML
sps00790 Folate biosynthesis SBML MML
sps00791 Atrazine degradation SBML MML
sps00860 Porphyrin and chlorophyll metabolism SBML MML
sps00900 Terpenoid backbone biosynthesis SBML MML
sps00903 (Undocumented) SBML MML
sps00910 Nitrogen metabolism SBML MML
sps00920 Sulfur metabolism SBML MML
sps00960 (Undocumented) SBML MML
sps00970 Aminoacyl-tRNA biosynthesis SBML MML
sps00982 (Undocumented) SBML MML
sps00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.