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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00641: 3-Chloroacrylic acid degradation

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aae00641 Aquifex aeolicus SBML MML
aau00641 Arthrobacter aurescens SBML MML
aav00641 Acidovorax avenae SBML MML
aba00641 Acidobacteria bacterium SBML MML
abc00641 Acinetobacter baumannii ACICU SBML MML
abm00641 Acinetobacter baumannii SDF SBML MML
abo00641 Alcanivorax borkumensis SBML MML
abu00641 Arcobacter butzleri SBML MML
aby00641 Acinetobacter baumannii AYE SBML MML
acb00641 Acinetobacter baumannii ATCC 17978 SBML MML
ace00641 Acidothermus cellulolyticus SBML MML
aci00641 Acinetobacter sp. ADP1 SBML MML
acl00641 Acholeplasma laidlawii SBML MML
acr00641 Acidiphilium cryptum JF-5 SBML MML
aeh00641 Alkalilimnicola ehrlichei SBML MML
afm00641 Aspergillus fumigatus SBML MML
afw00641 Anaeromyxobacter sp. Fw109-5 SBML MML
aga00641 Anopheles gambiae (mosquito) SBML MML
ago00641 Ashbya gossypii (Eremothecium gossypii) SBML MML
aha00641 Aeromonas hydrophila SBML MML
ajs00641 Acidovorax sp. JS42 SBML MML
amr00641 Acaryochloris marina SBML MML
amt00641 Alkaliphilus metalliredigens SBML MML
ana00641 Anabaena sp. PCC7120 SBML MML
ang00641 Aspergillus niger SBML MML
ani00641 Aspergillus nidulans SBML MML
aoe00641 Alkaliphilus oremlandii SBML MML
aor00641 Aspergillus oryzae SBML MML
apa00641 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
ape00641 Aeropyrum pernix SBML MML
apj00641 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
apl00641 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
art00641 Arthrobacter sp. FB24 SBML MML
asa00641 Aeromonas salmonicida SBML MML
asu00641 Actinobacillus succinogenes SBML MML
atc00641 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00641 Arabidopsis thaliana (thale cress) SBML MML
atu00641 Agrobacterium tumefaciens C58 SBML MML
ava00641 Anabaena variabilis SBML MML
azc00641 Azorhizobium caulinodans SBML MML
azo00641 Azoarcus sp. BH72 SBML MML
baa00641 Bacillus anthracis A2012 SBML MML
bac00641 Burkholderia ambifaria MC40-6 SBML MML
bad00641 Bifidobacterium adolescentis SBML MML
bam00641 Burkholderia cepacia SBML MML
ban00641 Bacillus anthracis Ames SBML MML
bar00641 Bacillus anthracis Ames 0581 SBML MML
bat00641 Bacillus anthracis Sterne SBML MML
bav00641 Bordetella avium SBML MML
bay00641 Bacillus amyloliquefaciens SBML MML
bba00641 Bdellovibrio bacteriovorus SBML MML
bbk00641 Bartonella bacilliformis SBML MML
bbr00641 Bordetella bronchiseptica SBML MML
bbt00641 Bradyrhizobium sp. BTAi1 SBML MML
bca00641 Bacillus cereus ATCC 10987 SBML MML
bce00641 Bacillus cereus ATCC 14579 SBML MML
bch00641 Burkholderia cenocepacia HI2424 SBML MML
bcl00641 Bacillus clausii SBML MML
bcm00641 Burkholderia cenocepacia MC0-3 SBML MML
bcn00641 Burkholderia cenocepacia AU1054 SBML MML
bcs00641 Brucella canis SBML MML
bcy00641 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00641 Bacillus cereus ZK SBML MML
bfr00641 Bacteroides fragilis YCH46 SBML MML
bha00641 Bacillus halodurans SBML MML
bhe00641 Bartonella henselae SBML MML
bid00641 Beijerinckia indica SBML MML
bja00641 Bradyrhizobium japonicum SBML MML
bld00641 Bacillus licheniformis DSM13 SBML MML
bli00641 Bacillus licheniformis ATCC 14580 SBML MML
blj00641 Bifidobacterium longum DJO10A SBML MML
blo00641 Bifidobacterium longum NCC2705 SBML MML
bma00641 Burkholderia mallei ATCC 23344 SBML MML
bmb00641 Brucella abortus 9-941 SBML MML
bmc00641 Brucella abortus S19 SBML MML
bme00641 Brucella melitensis 16M SBML MML
bmf00641 Brucella melitensis biovar Abortus SBML MML
bml00641 Burkholderia mallei NCTC 10229 SBML MML
bmn00641 Burkholderia mallei NCTC 10247 SBML MML
bms00641 Brucella suis 1330 SBML MML
bmt00641 Brucella suis ATCC 23445 SBML MML
bmu00641 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00641 Burkholderia mallei SAVP1 SBML MML
bmy00641 Brugia malayi (filaria) SBML MML
bov00641 Brucella ovis SBML MML
bpa00641 Bordetella parapertussis SBML MML
bpd00641 Burkholderia pseudomallei 668 SBML MML
bpe00641 Bordetella pertussis SBML MML
bph00641 Burkholderia phymatum SBML MML
bpl00641 Burkholderia pseudomallei 1106a SBML MML
bpm00641 Burkholderia pseudomallei 1710b SBML MML
bps00641 Burkholderia pseudomallei K96243 SBML MML
bpt00641 Bordetella petrii SBML MML
bpu00641 Bacillus pumilus SBML MML
bqu00641 Bartonella quintana SBML MML
bra00641 Bradyrhizobium sp. ORS278 SBML MML
bsu00641 Bacillus subtilis SBML MML
bta00641 Bos taurus (cow) SBML MML
bte00641 Burkholderia thailandensis SBML MML
btk00641 Bacillus thuringiensis 97-27 SBML MML
btl00641 Bacillus thuringiensis Al Hakam SBML MML
btr00641 Bartonella tribocorum SBML MML
bur00641 Burkholderia sp. 383 SBML MML
bvi00641 Burkholderia vietnamiensis SBML MML
bvu00641 Bacteroides vulgatus SBML MML
bwe00641 Bacillus weihenstephanensis SBML MML
bxe00641 Burkholderia xenovorans SBML MML
cac00641 Clostridium acetobutylicum SBML MML
cak00641 Caulobacter sp. K31 SBML MML
cau00641 Chloroflexus aurantiacus SBML MML
cba00641 Clostridium botulinum A ATCC 19397 SBML MML
cbb00641 Clostridium botulinum B1 Okra SBML MML
cbd00641 Coxiella burnetii Dugway 5J108-111 SBML MML
cbe00641 Clostridium beijerinckii SBML MML
cbf00641 Clostridium botulinum F Langeland SBML MML
cbh00641 Clostridium botulinum A Hall SBML MML
cbk00641 Clostridium botulinum B Eklund 17B SBML MML
cbl00641 Clostridium botulinum A3 Loch Maree SBML MML
cbo00641 Clostridium botulinum A ATCC 3502 SBML MML
cbs00641 Coxiella burnetii RSA 331 SBML MML
cbu00641 Coxiella burnetii RSA 493 SBML MML
cch00641 Chlorobium chlorochromatii SBML MML
cco00641 Campylobacter concisus 13826 SBML MML
ccr00641 Caulobacter crescentus CB15 SBML MML
ccv00641 Campylobacter curvus SBML MML
cdf00641 Clostridium difficile SBML MML
cdi00641 Corynebacterium diphtheriae SBML MML
cef00641 Corynebacterium efficiens SBML MML
cel00641 Caenorhabditis elegans (nematode) SBML MML
cfa00641 Canis familiaris (dog) SBML MML
cgb00641 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00641 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00641 Candida glabrata SBML MML
cgt00641 Corynebacterium glutamicum R SBML MML
cha00641 Campylobacter hominis ATCC BAA-381 SBML MML
cho00641 Cryptosporidium hominis SBML MML
chu00641 Cytophaga hutchinsonii SBML MML
chy00641 Carboxydothermus hydrogenoformans SBML MML
cjk00641 Corynebacterium jeikeium SBML MML
cju00641 Campylobacter jejuni 81116 SBML MML
ckl00641 Clostridium kluyveri DSM 555 SBML MML
cko00641 Citrobacter koseri ATCC BAA-895 SBML MML
cma00641 Caldivirga maquilingensis SBML MML
cme00641 Cyanidioschyzon merolae SBML MML
cmi00641 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00641 Clavibacter michiganensis subsp. sepedonicus SBML MML
cnb00641 Cryptococcus neoformans B-3501A SBML MML
cne00641 Cryptococcus neoformans JEC21 SBML MML
cpb00641 Chlorobium phaeobacteroides BS1 SBML MML
cpe00641 Clostridium perfringens 13 SBML MML
cpf00641 Clostridium perfringens ATCC 13124 SBML MML
cpr00641 Clostridium perfringens SM101 SBML MML
cps00641 Colwellia psychrerythraea SBML MML
cpv00641 Cryptosporidium parvum SBML MML
cpy00641 Clostridium phytofermentans SBML MML
cre00641 Chlamydomonas reinhardtii SBML MML
csa00641 Chromohalobacter salexigens SBML MML
csc00641 Caldicellulosiruptor saccharolyticus SBML MML
ctc00641 Clostridium tetani E88 SBML MML
cte00641 Chlorobaculum tepidum SBML MML
cth00641 Clostridium thermocellum SBML MML
cti00641 Cupriavidus taiwanensis SBML MML
cur00641 Corynebacterium urealyticum SBML MML
cvi00641 Chromobacterium violaceum SBML MML
cya00641 Cyanobacteria Yellowstone A-Prime SBML MML
cyb00641 Cyanobacteria Yellowstone B-Prime SBML MML
cyt00641 Cyanothece sp. ATCC 51142 SBML MML
daag00641 (Undocumented) SBML MML
dac00641 Delftia acidovorans SBML MML
dame00641 (Undocumented) SBML MML
dar00641 Dechloromonas aromatica SBML MML
dau00641 Candidatus Desulforudis audaxviator SBML MML
dbmo00641 Bombyx mori (silkmoth) SBML MML
dcbr00641 (Undocumented) SBML MML
dcin00641 (Undocumented) SBML MML
dde00641 Desulfovibrio desulfuricans G20 SBML MML
ddi00641 Dictyostelium discoideum SBML MML
decb00641 (Undocumented) SBML MML
dfru00641 Fugu rubripes (Japanese puffer fish) SBML MML
dha00641 Debaryomyces hansenii SBML MML
dkwa00641 Kluyveromyces waltii SBML MML
dme00641 Drosophila melanogaster (fruit fly) SBML MML
dol00641 Candidatus Desulfococcus oleovorans SBML MML
dola00641 Oryzias latipes (Japanese medaka) SBML MML
dota00641 Ostreococcus tauri SBML MML
dpkn00641 (Undocumented) SBML MML
dpo00641 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00641 (Undocumented) SBML MML
dps00641 Desulfotalea psychrophila SBML MML
dptm00641 (Undocumented) SBML MML
dra00641 Deinococcus radiodurans SBML MML
dre00641 Danio rerio (zebrafish) SBML MML
drm00641 Desulfotomaculum reducens SBML MML
dsba00641 Saccharomyces bayanus SBML MML
dsh00641 Dinoroseobacter shibae SBML MML
dsmi00641 Saccharomyces mikatae SBML MML
dspd00641 (Undocumented) SBML MML
dsy00641 Desulfitobacterium hafniense Y51 SBML MML
dtni00641 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00641 (Undocumented) SBML MML
dvl00641 Desulfovibrio vulgaris DP4 SBML MML
dvu00641 Desulfovibrio vulgaris Hildenborough SBML MML
dvvi00641 (Undocumented) SBML MML
eacp00641 (Undocumented) SBML MML
eath00641 Arabidopsis thaliana (thale cress) (EST) SBML MML
eba00641 Aromatoleum aromaticum EbN1 SBML MML
ebna00641 Brassica napus (rape) (EST) SBML MML
ebvl00641 Beta vulgaris (beet) (EST) SBML MML
eca00641 Erwinia carotovora SBML MML
ecan00641 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00641 Escherichia coli CFT073 (UPEC) SBML MML
ecd00641 Escherichia coli K-12 DH10B SBML MML
ece00641 Escherichia coli O157 EDL933 (EHEC) SBML MML
eci00641 Escherichia coli UTI89 (UPEC) SBML MML
ecj00641 Escherichia coli K-12 W3110 SBML MML
ecl00641 Escherichia coli ATCC 8739 SBML MML
ecm00641 Escherichia coli SECEC SBML MML
eco00641 Escherichia coli K-12 MG1655 SBML MML
ecp00641 Escherichia coli 536 (UPEC) SBML MML
ecs00641 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00641 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00641 Ciona savignyi (EST) SBML MML
ecv00641 Escherichia coli APEC O1 SBML MML
ecw00641 Escherichia coli E24377A SBML MML
ecx00641 Escherichia coli HS SBML MML
eees00641 Euphorbia esula (leafy spurge) (EST) SBML MML
efa00641 Enterococcus faecalis SBML MML
efar00641 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00641 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00641 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00641 Glycine max (soybean) (EST) SBML MML
egra00641 Gossypium raimondii (EST) SBML MML
ehan00641 Helianthus annuus (sunflower) (EST) SBML MML
ehi00641 Entamoeba histolytica SBML MML
ehvu00641 Hordeum vulgare (barley) (EST) SBML MML
eini00641 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00641 Erythrobacter litoralis SBML MML
elja00641 Lotus japonicus (lotus) (EST) SBML MML
elpe00641 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00641 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00641 Lactuca sativa (lettuce) (EST) SBML MML
elvi00641 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00641 Manihot esculenta (cassava) (EST) SBML MML
emte00641 Molgula tectiformis (EST) SBML MML
emtr00641 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00641 Nicotiana benthamiana (EST) SBML MML
ent00641 Enterobacter sp. 638 SBML MML
enta00641 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00641 Oryza sativa (rice) (EST) SBML MML
eosi00641 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00641 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00641 Picea glauca (white spruce) (EST) SBML MML
epop00641 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00641 (Undocumented) SBML MML
eppi00641 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00641 Physcomitrella patens subsp. patens (EST) SBML MML
epps00641 Prunus persica (peach) (EST) SBML MML
epsi00641 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00641 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00641 Populus tremula (European aspen) (EST) SBML MML
esa00641 Enterobacter sakazakii SBML MML
esbi00641 Sorghum bicolor (sorghum) (EST) SBML MML
esi00641 Exiguobacterium sibiricum SBML MML
esja00641 Schistosoma japonicum (fluke) (EST) SBML MML
esly00641 Solanum lycopersicum (tomato) (EST) SBML MML
esof00641 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00641 (Undocumented) SBML MML
espu00641 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00641 Solanum tuberosum (potato) (EST) SBML MML
eta00641 Erwinia tasmaniensis SBML MML
etae00641 Triticum aestivum (wheat) (EST) SBML MML
evvi00641 Vitis vinifera (wine grape) (EST) SBML MML
ezel00641 (Undocumented) SBML MML
ezma00641 Zea mays (maize) (EST) SBML MML
fal00641 Frankia alni SBML MML
fgr00641 Fusarium graminearum SBML MML
fjo00641 Flavobacterium johnsoniae SBML MML
fma00641 Finegoldia magna SBML MML
fno00641 Fervidobacterium nodosum SBML MML
fph00641 Francisella philomiragia SBML MML
fps00641 Flavobacterium psychrophilum SBML MML
fra00641 Frankia sp. CcI3 SBML MML
fre00641 Frankia sp. EAN1pec SBML MML
fta00641 Francisella tularensis subsp. holarctica FTNF002-00 SBML MML
ftf00641 Francisella tularensis subsp. tularensis FSC 198 SBML MML
ftl00641 Francisella tularensis subsp. holarctica LVS SBML MML
ftn00641 Francisella tularensis subsp. novicida U112 SBML MML
ftu00641 Francisella tularensis subsp. tularensis SCHU S4 SBML MML
gbe00641 Granulobacter bethesdensis SBML MML
gdi00641 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00641 Gramella forsetii SBML MML
gga00641 Gallus gallus (chicken) SBML MML
gka00641 Geobacillus kaustophilus SBML MML
gla00641 Giardia lamblia SBML MML
glo00641 Geobacter lovleyi SBML MML
gme00641 Geobacter metallireducens SBML MML
gox00641 Gluconobacter oxydans SBML MML
gsu00641 Geobacter sulfurreducens SBML MML
gur00641 Geobacter uraniumreducens SBML MML
gvi00641 Gloeobacter violaceus SBML MML
hal00641 Halobacterium sp. NRC-1 SBML MML
har00641 Herminiimonas arsenicoxydans SBML MML
hau00641 Herpetosiphon aurantiacus SBML MML
hch00641 Hahella chejuensis SBML MML
hha00641 Halorhodospira halophila SBML MML
hin00641 Haemophilus influenzae Rd KW20 (serotype d) SBML MML
hma00641 Haloarcula marismortui SBML MML
hne00641 Hyphomonas neptunium SBML MML
hsa00641 Homo sapiens (human) SBML MML
hsl00641 Halobacterium salinarum R1 SBML MML
hwa00641 Haloquadratum walsbyi SBML MML
iho00641 Ignicoccus hospitalis SBML MML
ilo00641 Idiomarina loihiensis SBML MML
jan00641 Jannaschia sp. CCS1 SBML MML
kcr00641 Candidatus Korarchaeum cryptofilum SBML MML
kla00641 Kluyveromyces lactis SBML MML
kpn00641 Klebsiella pneumoniae SBML MML
kra00641 Kineococcus radiotolerans SBML MML
krh00641 Kocuria rhizophila SBML MML
lac00641 Lactobacillus acidophilus SBML MML
lbc00641 Laccaria bicolor SBML MML
lbf00641 Leptospira biflexa serovar Patoc Patoc 1 (Ames) SBML MML
lbi00641 Leptospira biflexa serovar Patoc Patoc 1 (Paris) SBML MML
lbj00641 Leptospira borgpetersenii JB197 SBML MML
lbl00641 Leptospira borgpetersenii L550 SBML MML
lbr00641 Lactobacillus brevis SBML MML
lca00641 Lactobacillus casei ATCC 334 SBML MML
lch00641 Leptothrix cholodnii SBML MML
lci00641 Leuconostoc citreum SBML MML
lfe00641 Lactobacillus fermentum SBML MML
lga00641 Lactobacillus gasseri SBML MML
lic00641 Leptospira interrogans serovar Copenhageni SBML MML
lil00641 Leptospira interrogans serovar lai SBML MML
lin00641 Listeria innocua SBML MML
ljo00641 Lactobacillus johnsonii SBML MML
lla00641 Lactococcus lactis subsp. lactis IL1403 SBML MML
llc00641 Lactococcus lactis subsp. cremoris SK11 SBML MML
llm00641 Lactococcus lactis subsp. cremoris MG1363 SBML MML
lma00641 Leishmania major SBML MML
lme00641 Leuconostoc mesenteroides SBML MML
lmf00641 Listeria monocytogenes F2365 SBML MML
lmo00641 Listeria monocytogenes EGD-e SBML MML
lpc00641 Legionella pneumophila Corby SBML MML
lpf00641 Legionella pneumophila Lens SBML MML
lpl00641 Lactobacillus plantarum WCFS1 SBML MML
lpn00641 Legionella pneumophila Philadelphia 1 SBML MML
lpp00641 Legionella pneumophila Paris SBML MML
lre00641 Lactobacillus reuteri DSM 20016 SBML MML
lsa00641 Lactobacillus sakei SBML MML
lsl00641 Lactobacillus salivarius SBML MML
lsp00641 Lysinibacillus sphaericus SBML MML
lwe00641 Listeria welshimeri SLCC5334 SBML MML
lxx00641 Leifsonia xyli xyli CTCB07 SBML MML
maa00641 Mycoplasma agalactiae SBML MML
mab00641 Mycobacterium abscessus ATCC 19977T SBML MML
mac00641 Methanosarcina acetivorans SBML MML
maq00641 Marinobacter aquaeolei SBML MML
mar00641 Microcystis aeruginosa SBML MML
mav00641 Mycobacterium avium 104 SBML MML
mba00641 Methanosarcina barkeri SBML MML
mbb00641 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbo00641 Mycobacterium bovis AF2122/97 SBML MML
mbr00641 Monosiga brevicollis SBML MML
mca00641 Methylococcus capsulatus SBML MML
mcc00641 Macaca mulatta (rhesus monkey) SBML MML
mdo00641 Monodelphis domestica (opossum) SBML MML
mes00641 Mesorhizobium sp. BNC1 SBML MML
met00641 Methylobacterium sp. 4-46 SBML MML
mex00641 Methylobacterium extorquens SBML MML
mfa00641 Methylobacillus flagellatus SBML MML
mga00641 Mycoplasma gallisepticum SBML MML
mgi00641 Mycobacterium gilvum SBML MML
mgl00641 Malassezia globosa SBML MML
mgr00641 Magnaporthe grisea SBML MML
mjl00641 Mycobacterium sp. JLS SBML MML
mkm00641 Mycobacterium sp. KMS SBML MML
mle00641 Mycobacterium leprae TN SBML MML
mlo00641 Mesorhizobium loti SBML MML
mma00641 Methanosarcina mazei SBML MML
mmc00641 Mycobacterium sp. MCS SBML MML
mmi00641 Mycobacterium marinum M SBML MML
mmp00641 Methanococcus maripaludis S2 SBML MML
mmr00641 Maricaulis maris SBML MML
mmu00641 Mus musculus (mouse) SBML MML
mmw00641 Marinomonas sp. MWYL1 SBML MML
mpa00641 Mycobacterium avium paratuberculosis SBML MML
mpe00641 Mycoplasma penetrans SBML MML
mpt00641 Methylibium petroleiphilum SBML MML
mra00641 Mycobacterium tuberculosis H37Ra SBML MML
mrd00641 Methylobacterium radiotolerans SBML MML
mse00641 Metallosphaera sedula SBML MML
msm00641 Mycobacterium smegmatis SBML MML
msu00641 Mannheimia succiniciproducens SBML MML
mta00641 Moorella thermoacetica SBML MML
mtc00641 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00641 Mycobacterium tuberculosis F11 SBML MML
mtu00641 Mycobacterium tuberculosis H37Rv SBML MML
mul00641 Mycobacterium ulcerans SBML MML
mva00641 Mycobacterium vanbaalenii SBML MML
mxa00641 Myxococcus xanthus SBML MML
nar00641 Novosphingobium aromaticivorans SBML MML
nca00641 Nocardioides sp. JS614 SBML MML
ncr00641 Neurospora crassa SBML MML
net00641 Nitrosomonas eutropha SBML MML
neu00641 Nitrosomonas europaea SBML MML
nfa00641 Nocardia farcinica SBML MML
ngo00641 Neisseria gonorrhoeae SBML MML
nha00641 Nitrobacter hamburgensis SBML MML
nma00641 Neisseria meningitidis Z2491 (serogroup A) SBML MML
nmc00641 Neisseria meningitidis FAM18 (serogroup C) SBML MML
nme00641 Neisseria meningitidis MC58 (serogroup B) SBML MML
nmn00641 Neisseria meningitidis 053442 (serogroup C) SBML MML
nmr00641 Nitrosopumilus maritimus SBML MML
nmu00641 Nitrosospira multiformis SBML MML
noc00641 Nitrosococcus oceani SBML MML
nph00641 Natronomonas pharaonis SBML MML
npu00641 Nostoc punctiforme SBML MML
nve00641 Nematostella vectensis (sea anemone) SBML MML
nwi00641 Nitrobacter winogradskyi SBML MML
oaa00641 Ornithorhynchus anatinus (platypus) SBML MML
oan00641 Ochrobactrum anthropi SBML MML
oih00641 Oceanobacillus iheyensis SBML MML
olu00641 Ostreococcus lucimarinus SBML MML
ooe00641 Oenococcus oeni SBML MML
osa00641 Oryza sativa japonica (Japanese rice) SBML MML
ote00641 Opitutus terrae SBML MML
pac00641 Propionibacterium acnes SBML MML
pae00641 Pseudomonas aeruginosa PAO1 SBML MML
pai00641 Pyrobaculum aerophilum SBML MML
pan00641 Podospora anserina SBML MML
pap00641 Pseudomonas aeruginosa PA7 SBML MML
par00641 Psychrobacter arcticum SBML MML
pas00641 Pyrobaculum arsenaticum SBML MML
pat00641 Pseudoalteromonas atlantica SBML MML
pau00641 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pca00641 Pelobacter carbinolicus SBML MML
pcl00641 Pyrobaculum calidifontis SBML MML
pcr00641 Psychrobacter cryohalolentis SBML MML
pde00641 Paracoccus denitrificans SBML MML
pdi00641 Parabacteroides distasonis SBML MML
pen00641 Pseudomonas entomophila SBML MML
pfl00641 Pseudomonas fluorescens Pf-5 SBML MML
pfo00641 Pseudomonas fluorescens Pf0-1 SBML MML
pfu00641 Pyrococcus furiosus SBML MML
pgn00641 Porphyromonas gingivalis ATCC 33277 SBML MML
pha00641 Pseudoalteromonas haloplanktis SBML MML
pho00641 Pyrococcus horikoshii SBML MML
pic00641 Pichia stipitis SBML MML
pin00641 Psychromonas ingrahamii SBML MML
pis00641 Pyrobaculum islandicum SBML MML
pla00641 Parvibaculum lavamentivorans SBML MML
plu00641 Photorhabdus luminescens SBML MML
pma00641 Prochlorococcus marinus SS120 SBML MML
pmb00641 Prochlorococcus marinus AS9601 SBML MML
pmc00641 Prochlorococcus marinus MIT 9515 SBML MML
pme00641 Prochlorococcus marinus NATL1A SBML MML
pmf00641 Prochlorococcus marinus MIT 9303 SBML MML
pmg00641 Prochlorococcus marinus MIT 9301 SBML MML
pmh00641 Prochlorococcus marinus MIT 9215 SBML MML
pmi00641 Prochlorococcus marinus MIT9312 SBML MML
pmj00641 Prochlorococcus marinus MIT 9211 SBML MML
pmm00641 Prochlorococcus marinus MED4 SBML MML
pmn00641 Prochlorococcus marinus NATL2A SBML MML
pmo00641 Petrotoga mobilis SBML MML
pmt00641 Prochlorococcus marinus MIT9313 SBML MML
pmu00641 Pasteurella multocida SBML MML
pmy00641 Pseudomonas mendocina SBML MML
pna00641 Polaromonas naphthalenivorans SBML MML
pnu00641 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00641 Polaromonas sp. JS666 SBML MML
ppd00641 Pelobacter propionicus SBML MML
ppf00641 Pseudomonas putida F1 SBML MML
ppg00641 Pseudomonas putida GB-1 SBML MML
ppp00641 Physcomitrella patens subsp. patens SBML MML
ppr00641 Photobacterium profundum SBML MML
ppu00641 Pseudomonas putida KT2440 SBML MML
ppw00641 Pseudomonas putida W619 SBML MML
prw00641 Psychrobacter sp. PRwf-1 SBML MML
psa00641 Pseudomonas stutzeri SBML MML
psb00641 Pseudomonas syringae pv. syringae B728a SBML MML
psp00641 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00641 Pseudomonas syringae pv. tomato DC3000 SBML MML
pth00641 Pelotomaculum thermopropionicum SBML MML
pto00641 Picrophilus torridus SBML MML
ptr00641 Pan troglodytes (chimpanzee) SBML MML
pub00641 Candidatus Pelagibacter ubique SBML MML
pvi00641 Prosthecochloris vibrioformis SBML MML
rba00641 Rhodopirellula baltica SBML MML
rca00641 Roseiflexus castenholzii DSM13941 SBML MML
rde00641 Roseobacter denitrificans SBML MML
rec00641 Rhizobium etli CIAT 652 SBML MML
reh00641 Ralstonia eutropha H16 SBML MML
ret00641 Rhizobium etli CFN 42 SBML MML
reu00641 Ralstonia eutropha JMP134 SBML MML
rfr00641 Rhodoferax ferrireducens SBML MML
rha00641 Rhodococcus sp. RHA1 SBML MML
rle00641 Rhizobium leguminosarum SBML MML
rme00641 Ralstonia metallidurans SBML MML
rno00641 Rattus norvegicus (rat) SBML MML
rpa00641 Rhodopseudomonas palustris CGA009 SBML MML
rpb00641 Rhodopseudomonas palustris HaA2 SBML MML
rpc00641 Rhodopseudomonas palustris BisB18 SBML MML
rpd00641 Rhodopseudomonas palustris BisB5 SBML MML
rpe00641 Rhodopseudomonas palustris BisA53 SBML MML
rpt00641 Rhodopseudomonas palustris TIE-1 SBML MML
rrs00641 Roseiflexus sp. RS-1 SBML MML
rru00641 Rhodospirillum rubrum SBML MML
rsa00641 Renibacterium salmoninarum SBML MML
rso00641 Ralstonia solanacearum SBML MML
rsp00641 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00641 Rhodobacter sphaeroides ATCC 17025 SBML MML
rxy00641 Rubrobacter xylanophilus SBML MML
saa00641 Staphylococcus aureus USA300 SBML MML
sab00641 Staphylococcus aureus RF122 SBML MML
sac00641 Staphylococcus aureus COL SBML MML
sae00641 Staphylococcus aureus Newman SBML MML
sag00641 Streptococcus agalactiae 2603 (serotype V) SBML MML
sah00641 Staphylococcus aureus JH1 SBML MML
sai00641 Sulfolobus acidocaldarius SBML MML
saj00641 Staphylococcus aureus JH9 SBML MML
sak00641 Streptococcus agalactiae A909 (serotype Ia) SBML MML
sal00641 Sphingopyxis alaskensis SBML MML
sam00641 Staphylococcus aureus MW2 SBML MML
san00641 Streptococcus agalactiae NEM316 (serotype III) SBML MML
sao00641 Staphylococcus aureus NCTC8325 SBML MML
saq00641 Salinispora arenicola SBML MML
sar00641 Staphylococcus aureus MRSA252 SBML MML
sas00641 Staphylococcus aureus MSSA476 SBML MML
sat00641 Syntrophus aciditrophicus SBML MML
sau00641 Staphylococcus aureus N315 SBML MML
sav00641 Staphylococcus aureus Mu50 SBML MML
saw00641 Staphylococcus aureus Mu3 SBML MML
sax00641 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00641 Shewanella amazonensis SBML MML
sbc00641 Shigella boydii CDC 3083-94 SBML MML
sbl00641 Shewanella baltica OS155 SBML MML
sbm00641 Shewanella baltica OS185 SBML MML
sbn00641 Shewanella baltica OS195 SBML MML
sbo00641 Shigella boydii Sb227 SBML MML
sce00641 Saccharomyces cerevisiae SBML MML
scl00641 Sorangium cellulosum SBML MML
sco00641 Streptomyces coelicolor SBML MML
sdn00641 Shewanella denitrificans SBML MML
sdy00641 Shigella dysenteriae SBML MML
sec00641 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00641 Saccharopolyspora erythraea SBML MML
sep00641 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00641 Staphylococcus epidermidis RP62A SBML MML
ses00641 Salmonella enterica subsp. arizonae SBML MML
sfl00641 Shigella flexneri 301 (serotype 2a) SBML MML
sfr00641 Shewanella frigidimarina SBML MML
sfu00641 Syntrophobacter fumaroxidans SBML MML
sfv00641 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00641 Shigella flexneri 2457T (serotype 2a) SBML MML
sgl00641 Sodalis glossinidius SBML MML
sgo00641 Streptococcus gordonii SBML MML
sgr00641 Streptomyces griseus SBML MML
sha00641 Staphylococcus haemolyticus SBML MML
she00641 Shewanella sp. MR-4 SBML MML
shl00641 Shewanella halifaxensis SBML MML
shm00641 Shewanella sp. MR-7 SBML MML
shn00641 Shewanella sp. ANA-3 SBML MML
shw00641 Shewanella sp. W3-18-1 SBML MML
sil00641 Ruegeria pomeroyi SBML MML
sit00641 Silicibacter sp. TM1040 SBML MML
slo00641 Shewanella loihica SBML MML
sma00641 Streptomyces avermitilis SBML MML
smd00641 Sinorhizobium medicae SBML MML
sme00641 Sinorhizobium meliloti SBML MML
sml00641 Stenotrophomonas maltophilia SBML MML
smr00641 Staphylothermus marinus SBML MML
smu00641 Streptococcus mutans SBML MML
son00641 Shewanella oneidensis SBML MML
spa00641 Streptococcus pyogenes MGAS10394 (serotype M6) SBML MML
spb00641 Streptococcus pyogenes MGAS6180 (serotype M28) SBML MML
spc00641 Shewanella putrefaciens SBML MML
spd00641 Streptococcus pneumoniae D39 SBML MML
spe00641 Serratia proteamaculans SBML MML
spf00641 Streptococcus pyogenes Manfredo (serotype M5) SBML MML
spg00641 Streptococcus pyogenes MGAS315 (serotype M3) SBML MML
sph00641 Streptococcus pyogenes MGAS10270 (serotype M2) SBML MML
spi00641 Streptococcus pyogenes MGAS10750 (serotype M4) SBML MML
spj00641 Streptococcus pyogenes MGAS2096 (serotype M12) SBML MML
spk00641 Streptococcus pyogenes MGAS9429 (serotype M12) SBML MML
spl00641 Shewanella pealeana SBML MML
spm00641 Streptococcus pyogenes MGAS8232 (serotype M18) SBML MML
spn00641 Streptococcus pneumoniae TIGR4 SBML MML
spo00641 Schizosaccharomyces pombe SBML MML
spq00641 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spr00641 Streptococcus pneumoniae R6 SBML MML
sps00641 Streptococcus pyogenes SSI-1 (serotype M3) SBML MML
spt00641 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spu00641 Strongylocentrotus purpuratus (purple sea urchin) SBML MML
spv00641 Streptococcus pneumoniae Hungary19A 6 SBML MML
spw00641 Streptococcus pneumoniae CGSP14 (serotype 14) SBML MML
spy00641 Streptococcus pyogenes SF370 (serotype M1) SBML MML
spz00641 Streptococcus pyogenes MGAS5005 (serotype M1) SBML MML
sru00641 Salinibacter ruber SBML MML
ssa00641 Streptococcus sanguinis SBML MML
sse00641 Shewanella sediminis SBML MML
ssn00641 Shigella sonnei SBML MML
sso00641 Sulfolobus solfataricus SBML MML
ssp00641 Staphylococcus saprophyticus SBML MML
ssu00641 Streptococcus suis 05ZYH33 SBML MML
ssv00641 Streptococcus suis 98HAH33 SBML MML
stc00641 Streptococcus thermophilus CNRZ1066 SBML MML
ste00641 Streptococcus thermophilus LMD-9 SBML MML
sth00641 Symbiobacterium thermophilum SBML MML
stl00641 Streptococcus thermophilus LMG18311 SBML MML
stm00641 Salmonella typhimurium LT2 SBML MML
sto00641 Sulfolobus tokodaii SBML MML
stp00641 Salinispora tropica SBML MML
stt00641 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00641 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sus00641 Solibacter usitatus SBML MML
swd00641 Shewanella woodyi ATCC 51908 SBML MML
swi00641 Sphingomonas wittichii SBML MML
syc00641 Synechococcus elongatus PCC6301 SBML MML
syd00641 Synechococcus sp. CC9605 SBML MML
sye00641 Synechococcus sp. CC9902 SBML MML
syf00641 Synechococcus elongatus PCC7942 SBML MML
syg00641 Synechococcus sp. CC9311 SBML MML
syn00641 Synechocystis sp. PCC6803 SBML MML
syp00641 Synechococcus sp. PCC7002 SBML MML
syr00641 Synechococcus sp. RCC307 SBML MML
syw00641 Synechococcus sp. WH8102 SBML MML
syx00641 Synechococcus sp. WH7803 SBML MML
tac00641 Thermoplasma acidophilum SBML MML
tbd00641 Thiobacillus denitrificans SBML MML
tbr00641 Trypanosoma brucei SBML MML
tca00641 Tribolium castaneum (red flour beetle) SBML MML
tcr00641 Trypanosoma cruzi SBML MML
tcx00641 Thiomicrospira crunogena SBML MML
tde00641 Treponema denticola SBML MML
tel00641 Thermosynechococcus elongatus SBML MML
ter00641 Trichodesmium erythraeum SBML MML
tet00641 Tetrahymena thermophila SBML MML
tex00641 Thermoanaerobacter sp. X514 SBML MML
tfu00641 Thermobifida fusca SBML MML
tko00641 Thermococcus kodakaraensis SBML MML
tle00641 Thermotoga lettingae SBML MML
tma00641 Thermotoga maritima SBML MML
tme00641 Thermosipho melanesiensis SBML MML
tne00641 Thermoproteus neutrophilus SBML MML
tpd00641 Thermoanaerobacter pseudethanolicus SBML MML
tpe00641 Thermofilum pendens SBML MML
tpt00641 Thermotoga petrophila SBML MML
trq00641 Thermotoga sp. RQ2 SBML MML
tte00641 Thermoanaerobacter tengcongensis SBML MML
tth00641 Thermus thermophilus HB27 SBML MML
ttj00641 Thermus thermophilus HB8 SBML MML
tva00641 Trichomonas vaginalis SBML MML
tvo00641 Thermoplasma volcanium SBML MML
twh00641 Tropheryma whipplei Twist SBML MML
tws00641 Tropheryma whipplei TW08/27 SBML MML
uma00641 Ustilago maydis SBML MML
vch00641 Vibrio cholerae O1 SBML MML
vco00641 Vibrio cholerae O395 SBML MML
vei00641 Verminephrobacter eiseniae SBML MML
vfi00641 Vibrio fischeri SBML MML
vha00641 Vibrio harveyi SBML MML
vpa00641 Vibrio parahaemolyticus SBML MML
vpo00641 Vanderwaltozyma polyspora SBML MML
vvu00641 Vibrio vulnificus CMCP6 SBML MML
vvy00641 Vibrio vulnificus YJ016 SBML MML
xac00641 Xanthomonas axonopodis SBML MML
xau00641 Xanthobacter autotrophicus SBML MML
xcb00641 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00641 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00641 Xanthomonas campestris pv. vesicatoria SBML MML
xfa00641 Xylella fastidiosa 9a5c SBML MML
xfm00641 Xylella fastidiosa M12 SBML MML
xfn00641 Xylella fastidiosa M23 SBML MML
xft00641 Xylella fastidiosa Temecula1 SBML MML
xla00641 Xenopus laevis (African clawed frog) SBML MML
xom00641 Xanthomonas oryzae MAFF311018 SBML MML
xoo00641 Xanthomonas oryzae KACC10331 SBML MML
xtr00641 Xenopus tropicalis (western clawed frog) SBML MML
yen00641 Yersinia enterocolitica SBML MML
yli00641 Yarrowia lipolytica SBML MML
ypa00641 Yersinia pestis Antiqua SBML MML
ype00641 Yersinia pestis CO92 SBML MML
ypg00641 Yersinia pestis Angola SBML MML
ypi00641 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00641 Yersinia pestis KIM SBML MML
ypm00641 Yersinia pestis Mediaevails SBML MML
ypn00641 Yersinia pestis Nepal516 SBML MML
ypp00641 Yersinia pestis Pestoides SBML MML
yps00641 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00641 Yersinia pseudotuberculosis YPIII SBML MML
zmo00641 Zymomonas mobilis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.